Halomonas aestuarii: BOX17_14465
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Entry
BOX17_14465 CDS
T04554
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BOX17_14465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsi03400
]
BOX17_14465
Enzymes [BR:
hsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BOX17_14465
DNA repair and recombination proteins [BR:
hsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BOX17_14465
Prokaryotic type
BOX17_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Mito_carr
MORF_dom
Motif
Other DBs
NCBI-ProteinID:
APE32050
UniProt:
A0A1J0VJ58
LinkDB
All DBs
Position
3139309..3140010
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AA seq
233 aa
AA seq
DB search
MTTCPLPGSWQQWLGDEFSLPYMQSLRDFLAAEKAARKVIYPHSTDWFRAFELTPLDRVK
VVILGQDPYHGPNQAHGLCFSVRPGVRVPPSLVNIYKELASDVGFTPVYHGNLEAWARQG
VLLLNTSLTVEQGQAGSHRGKGWETFTDRAIATVSEHADPSVFLLWGGPARKKRALVDTS
RHLVLESPHPSPLSAHRGFFGNHHFSRANAFLVEQGREPIDWQLPETPEGDPS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacctgtccgcttcccggcagctggcagcagtggctgggtgacgagttctcgctg
ccctacatgcagtcgctgcgcgatttcctggccgccgagaaggcggccaggaaggtgatc
tatccgcattcgaccgactggttccgcgccttcgagctgaccccgctggaccgggtcaag
gtggtgatcctgggccaggatccctaccacgggccgaaccaggcccatggcctgtgcttc
tcggtgcgccccggcgtgcgcgtgccgccgtcgctcgtcaacatctacaaggaactggcc
agcgacgtgggctttacgcccgtgtatcacggcaacctggaggcctgggcgcgccagggc
gtgctgctgctcaacacctcgctgacggtggagcagggccaggccggctcccaccgtggc
aagggctgggagaccttcaccgaccgggccatcgccacggtgagcgagcacgccgacccc
tcggtcttcctgctgtggggcggcccggcgcgcaagaagcgggcgctggtcgatacctcc
cgccacctggtgctggagtcgccgcatccctcgccgctgtctgcccaccgcggtttcttc
ggcaaccaccacttctcccgggccaacgccttcctggtggagcaggggcgagagcccatc
gattggcagcttcccgagacgcccgagggcgatccttcctga
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