Haloarcula sinaiiensis: KDQ40_01470
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Entry
KDQ40_01470 CDS
T07272
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula sinaiiensis
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_01470
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_01470
Prokaryotic type
Archaeal type
TFB
KDQ40_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Sigma70_r4
Zn_ribbon_LysW
HTH_Tnp_ISL3
Anti-TRAP
DZR_2
Cyclin_C
DUF5817
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QUJ72451
UniProt:
M0K5J4
LinkDB
All DBs
Position
complement(287883..288848)
Genome browser
AA seq
321 aa
AA seq
DB search
MSEHTRTRQQREEQTTESTESESTACPECSGSLVIDDEHGETVCEDCGLVVESDEIDRGP
EWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVST
ASVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVRELSLEVRPADPESYVPRFASS
LELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLPVA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacacacacggacacgacagcagcgtgaagaacagacgacggagtcgacggaa
tcggagagcacagcgtgcccggagtgcagtggctcgctcgttatcgacgacgaacacggc
gaaacggtctgtgaggactgtggcctggtcgtcgagtccgacgaaatcgaccgcggcccc
gagtggcgcgcgttcgactccagcgagaaagacgagaagtcccgcgtcggtgcgccgacg
acgaacatgatgcacgacaaggggctgtcgaccaacatcgactggcgcgacaaggacgcc
tacggcaactccctgtcgggcaagcagcgccagaagatgcagcgcctgcgcaagtggaac
gagcgctttagaacgcgagactccaaggaacgcaacctcaagcaggcccttggtgagatt
gaccggatggcttctgcgctcggcctccccgaaaacgtccgcgaaacggccagcgtcatc
taccgccgcgcgctcgacgaggacctgctccccggccgctccatcgagggcgtttcgacg
gcgtccgtctacgccgccgcgcgacaggctggcgtcccacgctcgctcgacgagatcacg
gaggtctcccgcgtcgagaagagcgaaatcgcccggacctaccgctacgtcgtccgcgaa
ctctcgctcgaagtgcgccctgctgaccccgagagctacgttccgcgctttgcttcctcg
ctggaactgtccgacgaggccgagcaccgcgcccgccagcttctccagaacgcaaaagag
cagggcgtccactctgggaagtcaccggtcggcctcgccgccgccgcggtgtacgccgcc
gcactgctgaccaacgagaagacgacgcaggccgccgtgtctgaggtcgccgacatctcc
gaggtcactatccgcaaccgttaccacgaactgctggaagccgagcaggacctgcctgtc
gcgtaa
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