Haloarcula marismortui ATCC 33800: KDQ40_01955
Help
Entry
KDQ40_01955 CDS
T07272
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hsin
Haloarcula marismortui ATCC 33800
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsin03016
]
KDQ40_01955 (truD)
Enzymes [BR:
hsin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KDQ40_01955 (truD)
Transfer RNA biogenesis [BR:
hsin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KDQ40_01955 (truD)
Prokaryotic type
KDQ40_01955 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QUJ72544
UniProt:
M0K354
LinkDB
All DBs
Position
388562..389944
Genome browser
AA seq
460 aa
AA seq
DB search
MQAAHPIERAVGMEYYVSDADGVGGRLRSSPADFRVRELEAFDTEPVDADTGAYPHLVFR
AELRNWETNDFASKLSDRLGISRERVSWAGTKDKRAVTTQLFSVKGVAAGDLPEIGGTDI
EVIGRAGRPILFGDLAGNAFEIVVRDTENTDNAASVVADLRAFANGDDSVTSEGRSSDAT
LPDGDTTVGVPNYFGQQRFGSRRPVTHEVGLAIARGEWKDAVLAYVGNPNEREPESTQEA
RGYVDETHDWAGALDRLPGALGYERSICHRLVENGASEPADFREALEALPSNLQSLFVNA
AQSYVFNRILSERLERGLPFDRPVEGDVVCFRDSDAPEDFPIPDADRTQEVTAKRLSTVE
RHCERGRAFVTAPLVGTDTELGSGEPGDIAREVLDDVGLEQGDFDLPGAFDSDGTRRAIL
LRTELGVERDSADLTFSFSLPKGSYATVLLREFRKGDPDA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcccacccaatcgagcgggcggtcggtatggagtattacgtcagcgacgcc
gacggggtgggcggccgcctccgctcgtcgcccgcggacttccgcgtccgggaactggag
gcgttcgacaccgaaccggtcgacgccgacaccggcgcgtacccgcacctcgtcttccgg
gcggagctacggaactgggaaaccaacgacttcgccagcaagctctccgaccgcctgggc
atctcccgcgaacgggtgtcgtgggcggggacgaaagacaagcgcgcggtcacgacccag
ctattctcggtgaaaggggtcgcagccggggacctgccggaaatcggcggcacggacatc
gaggtcatcggtcgcgccggccgcccgattctcttcggcgacctggcgggcaacgccttc
gagatcgtcgtccgggacaccgagaacaccgataacgccgccagcgtcgtagcggacctc
cgggcgttcgccaacggggacgactcagtgacgagcgaaggccggtccagcgacgccacg
ctgcctgacggcgacacgacggtcggcgtgcccaactacttcggccagcagcggttcggg
tcgcgccgaccggtcacccacgaggtcgggctggccatcgcccgtggcgagtggaaagac
gcggttctcgcctacgtcggaaacccgaacgagcgcgaaccagagtcaacgcaggaggcg
cggggatacgtcgacgaaacccacgactgggccggcgcgctggacaggctgcccggcgcg
ctgggctacgaacgctccatctgtcaccggctggtcgagaacggggccagcgagccggca
gacttccgcgaggcactggaggcgctgccgtcgaacctccagtcgctgttcgtcaacgcc
gcccagtcgtacgtcttcaaccgcatcctttccgagcggctggaacggggcctccccttc
gaccggcccgtggaaggcgacgtagtctgtttccgtgacagcgacgcgcccgaggacttc
ccgattccggacgccgaccgcacccaggaagtcactgccaagcggctgtcgaccgttgag
cgccactgcgagcgcgggagagcgtttgtcaccgcgccgctggtcgggaccgataccgag
ctgggcagtggcgaaccgggcgatatcgctcgtgaagtccttgacgacgtgggcctcgaa
cagggcgacttcgacctccccggcgcgttcgacagcgacgggacgcggcgggccatcctg
cttcggactgaactcggtgttgagcgcgatagcgccgacctgacgttctcgttctccctg
ccaaaggggagctacgcgacggtcctcctccgggagttccggaaaggcgacccggacgcg
tag
DBGET
integrated database retrieval system
