Haloarcula marismortui ATCC 33800: KDQ40_05460
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Entry
KDQ40_05460 CDS
T07272
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KDQ40_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsin03019
]
KDQ40_05460
Messenger RNA biogenesis [BR:
hsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
KDQ40_05460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
QUJ73196
UniProt:
M0JWV9
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All DBs
Position
1072488..1073555
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AA seq
355 aa
AA seq
DB search
MQIQSQETTAEGAERIEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGE
REPMWIQIEVTDVEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD
QADRLEEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGKGEYARPRKELF
DELASVLKRQDVDAYILAGPGFTKQDALDHFQDEIPDIAEQITVVDTSAVGDRGVHEVLK
RGAVEDVQQQTRIAEEADYIDELMARIGSGSEVAYGPKEVAKAADYGAIETLLVLDERLR
LERAGEGDWDIDVDQIIETTEQKGGDVTVFSAEFAPGQQLSNLGGVAGLLRYRLD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatacagagtcaggagaccaccgcggaaggggcagaacgcatcgaggtggtcccc
gagacgcttgacgacctctggcacctctcgtatgtcatcgagccgggggacctcgtctct
ggcgacacgacgcggcgcatccagcgcaacgatgacaacctccgggacaaaggcggcgag
cgcgagccgatgtggattcagatcgaggtcaccgacgtggagttcgcgaagttcgccaac
cgcctccgtgtcggcggcgaaattgtcgattgctcccgcgaggaccagctgggctttcac
cacacgctcaacgtcgaggaacacactgaactcaccgtcgagaagcacctcaagcccgat
caggccgaccgtctggaagaggccgtcgaggcgacggagaaccccgacgtggcgattgcg
accgtagaggaaggagaggctcacgtccacactgtcgcccagtacggcaccgaggagcga
gcgacgatcacctcgacgaccgggaagggggagtacgcccgtccacggaaggaactgttc
gacgagctggcgtcagtcctcaaacggcaggacgtggacgcctacatccttgcgggtccc
ggcttcaccaaacaggacgcgctggaccactttcaggacgagattcccgatatcgccgaa
cagattactgtcgtcgacacgtccgccgtcggcgaccgcggtgtccacgaagtactcaaa
cgcggcgctgtcgaggacgtccagcagcagacccgcatcgctgaggaggcggactacatc
gacgaactgatggcgcgcatcggctcaggctcggaggtggcctacggaccgaaagaagtc
gccaaggcggccgactacggcgctattgagacgctgctcgtgctggacgaacgactccgg
ctggagcgggccggcgagggcgactgggatatcgatgtcgaccagatcatcgaaacgaca
gaacagaaaggcggcgacgtaaccgtcttctccgcggagtttgcgcccggacagcaactc
tcgaatctgggcggtgtcgcggggctactgcgttaccgcctcgattga
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