Haloarcula sinaiiensis: KDQ40_05970
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Entry
KDQ40_05970 CDS
T07272
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hsin
Haloarcula sinaiiensis
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_05970 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_05970 (tfe)
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
KDQ40_05970 (tfe)
Prokaryotic type
Archaeal type
TFE
KDQ40_05970 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7129
DUF7576
Sigma70_r3
HypA
Zn_ribbon_6
Zn_ribbon_3
Zn_ribbon_8
NRDD
Zn_ribbon_LysW
Zn_ribbon_TiaS
DUF7575
DUF7560
HVO_2753_ZBP
DZR
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QUJ73295
UniProt:
M0JX77
LinkDB
All DBs
Position
complement(1175569..1176099)
Genome browser
AA seq
176 aa
AA seq
DB search
MAFEELLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFQYEKIPEQLQEEMHRLLDGLEERREYERENEFYLCE
HCGIRFEFGEAMEFGFECPECGNQVETMENTRLVTAMENRLEELRDELNADVDVEA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaactcttggaggaccccgtcatacagaaatacctccacgagctggtc
ggaccgaaagggatgccggtcgccgccgcgccgccggacggcgaagtgaccgacgaagaa
ctggccgaggagctcggactcgaactgaacgacgttcgccgagcgctgtttattctctac
gagaacgacctcgcgacctatcgtcggctccgcgacgaggactctgggtggctcacgtac
ctctggacgttccagtacgagaagatccccgaacaactgcaagaggagatgcaccgcctg
ctcgacggcctcgaagagcgccgcgagtacgagcgggaaaacgagttctacctctgtgag
cactgcggtatccgcttcgagttcggcgaggcaatggagttcggcttcgagtgccccgaa
tgtggcaatcaagtcgagacgatggagaacacccgtctcgtcaccgcgatggagaatcgc
ctcgaggagcttagagacgaactgaacgctgacgtggacgtggaagcctga
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