KEGG   Haloarcula marismortui ATCC 33800: KDQ40_07615
Entry
KDQ40_07615       CDS       T07272                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hsin  Haloarcula marismortui ATCC 33800
Pathway
hsin03030  DNA replication
hsin03410  Base excision repair
hsin03420  Nucleotide excision repair
hsin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KDQ40_07615
   03410 Base excision repair
    KDQ40_07615
   03420 Nucleotide excision repair
    KDQ40_07615
   03430 Mismatch repair
    KDQ40_07615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsin03032]
    KDQ40_07615
   03400 DNA repair and recombination proteins [BR:hsin03400]
    KDQ40_07615
Enzymes [BR:hsin01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     KDQ40_07615
    6.5.1.6  DNA ligase (ATP or NAD+)
     KDQ40_07615
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     KDQ40_07615
DNA replication proteins [BR:hsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    KDQ40_07615
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     KDQ40_07615
DNA repair and recombination proteins [BR:hsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     KDQ40_07615
   NER (nucleotide excision repair)
    Other NER factors
     KDQ40_07615
   MMR (mismatch excision repair)
    Other MMR factors
     KDQ40_07615
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QUJ73603
UniProt: M0K063
LinkDB
Position
complement(1499930..1501594)
AA seq 554 aa
MEFAAFADRAEAIESESADTAITEAVTDLFRASGSDLSTLARFVQGRVFPAYESRTLDIG
PRLCYEAIARAAGQNVSADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGGGDDALT
VAELDDELRNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVR
DAAAAAFDVSVEAVERAVQVSNDYGMVAEVARDEGESGLATVTLEIGRPVQAMLAQAGTV
AGALEDWDRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVETVESTLDAPAI
LDGEVVAVDNGGDPLPFQEVLRRFRRKHDVAAAREDVAVRLHAFDCLHAAGEDLLDAALE
TRHDRLESLFPADSDVVSQMWLSDDPDEIEDLETAALDAGQEGIMLKDPTAAYSPGKRGK
HWRKRKPDVETLDCVVTGAEWGEGRRANVLGSFELSVRTDDGYATVGNVATGITDEELDD
LTERFEPYIRSEDGRDVVLDPAVVFEVGYEEIQASQSYASGYALRFPRFLSVREDKTPDS
ADSLARVERLAESQ
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggagtttgccgccttcgccgaccgcgccgaagcaatagaatctgagagtgccgatacc
gcgattacggaggcggtgaccgacctgttccgagcatccggttcggacctctcgacgctt
gctcgcttcgttcagggtcgagtgtttccggcctatgaatcccgcacgctcgacatcggg
ccgcggctctgctacgaggcgattgcccgggcggccggccagaacgtcagcgccgacgac
gtggagcagcgcctcgccgacatgggcgaaatcggggccgtcgcggccagctacgacctc
ggtggtcagcagggcctcgccgcgttcggtgctggtggtggaggggacgacgcgctgacc
gtcgcggaactcgacgacgagctacgaaacctggcggctgtcgacggcagtgggagccaa
gggacgaaagtcgatatcctctttggcctgttctcgcggtgttcgtcgacggaagccggc
tacctcgcccgcctcgtcctctcagagatgcgtatcggcgtcggcgaggggacggtccgg
gacgccgccgcggccgcttttgacgtgtcagtcgaggccgtcgaacgggccgtgcaggtg
tcgaacgactacggtatggttgccgaagtggcccgcgacgaaggggagtccggactggcg
accgtcaccctcgaaatcggccgccccgttcaggcgatgctggcacaggcgggcacggtc
gctggcgcgctcgaagactgggaccgcgccgcggtcgagtggaagtacgacggcgctcgc
gtgcaggtccacttcgacggcgaggacgcgcggctgttctcccggaacatggaggaagtc
accgacccgctcccggaggttgtcgagaccgtggagtcgacgctggacgcaccggcaatc
ctcgacggtgaggtggtcgcggtcgacaacggcggcgacccgctcccgtttcaggaggtc
ttgcggcgcttccgccggaaacacgacgtggccgcggcacgcgaagacgtggccgtccgg
ctacacgcattcgactgtctgcacgccgccggtgaggacctgctcgacgccgcgctggaa
acgcgccacgaccgtctcgaatcgctgttcccggctgacagcgacgttgtctcgcagatg
tggctctcggacgaccccgacgagattgaagacctggaaacggcggccctcgacgctggg
caggagggaatcatgctgaaagacccgactgcagcctactcgcccggaaagcggggcaag
cactggcgcaagcgcaaacccgacgtagagacgctggattgcgtcgtcaccggcgcggaa
tggggcgaaggccgccgggcgaacgtgctcggctcgttcgagctttctgtccgaaccgac
gacggctacgccaccgtcgggaacgtcgcgactggcatcaccgacgaggaactggacgac
ctgaccgagcggttcgaaccgtacatccggagcgaggacggccgcgacgtagtgctcgac
ccggccgttgtcttcgaagtcggctacgaggagatacaggcttcccagtcctacgcctcg
ggctacgcgcttcggttcccccggttcctctcggtccgcgaggacaagacgcctgacagc
gctgactcgcttgcgcgcgttgagcgactggccgagtcacagtag

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