Haloarcula marismortui ATCC 33800: KDQ40_08870
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Entry
KDQ40_08870 CDS
T07272
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03022
Basal transcription factors
hsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_08870
09124 Replication and repair
03420 Nucleotide excision repair
KDQ40_08870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_08870
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_08870
Enzymes [BR:
hsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDQ40_08870
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KDQ40_08870
DNA repair and recombination proteins [BR:
hsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KDQ40_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
DEAD
SNF2-rel_dom
AAA
AAA_22
AAA_30
AAA_25
AAA_5
AAA_33
DUF4283
nSTAND3
DUF4423
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QUJ70842
UniProt:
M0JZ09
LinkDB
All DBs
Position
complement(1735724..1737589)
Genome browser
AA seq
621 aa
AA seq
DB search
MTDEEPADRDDDSDSTPELELDAVYDAIDAVGRPHLTATEFSRKTDLTPDEARAALERLA
DDGDIERQDVSEVESVWYPTDIAEVTDRERVVLFPDRREVVVEHPDQFTRAQLSQFARLQ
DTNRSGGYVYELREEDIWAAPHESLDDLLTTMRDVLGERSPHLEEWVTSQWERARKFRLK
THEDGYVVLEAESDDLMGNVARPKLDDDHLRAPISDSESWVNEDATAEIKRTLYEAGYPV
RDDRDLETGDAIEMDLRLRLRDYQQDWVERFTEQGSGVFVGPPGSGKTVAAMGAMAAIGG
ETLILVPSRELATQWRDELVRHTSLTDDDIGEYHGGEKEIRAVTIATYRTAGMDRHRKLF
DQRKWGLIVFDEVHHVPSPIHRRSADLQTKHRLGLTATPTRESDDEEEIFTLIGPPIGTD
WGKLFDEGYVAEPEVEIRLVPWGDETEQSEYSSTSGHDRRQAAASNTGKIDEIRYALAEN
PAAKALVFIEYLDQGEAISEAIDAPFISGETPHARREKLFDEFRRGELTTLVVSRVGDEG
IDLPDAELALVASGLGGSRRQGAQRAGRTMRPAGDARMVILATRGTTEEDFVRRQMRHLA
SKGIRVTETEAEAVEPPAKTE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgaggagccagccgaccgagacgacgactctgactccaccccggaactcgaa
ctcgacgccgtctacgacgccatcgacgccgtcggccgtccgcatctgacggcgacggag
ttctctcgcaaaacggatctgacgcccgacgaggcacgggcggcactggagcgtctcgcc
gacgacggcgacatcgagcgtcaggacgtgtccgaggtcgagtccgtgtggtatccgaca
gatattgccgaggtgaccgaccgcgagcgtgtggtcctgtttcccgaccgccgggaagtc
gtcgtcgaacatcccgaccagttcacgcgagcacagctctcgcagttcgcccgcctgcaa
gacaccaaccgctcgggcggctacgtgtacgaactccgcgaggaggatatctgggccgcg
ccccacgagtccttagacgaccttctgacgacgatgcgggacgtgctgggcgagcgctcg
cctcacctcgaagaatgggtgacgagccagtgggaacgagcccggaagttccgcctgaag
actcacgaagacgggtacgtcgtactcgaagctgaaagcgacgacctgatgggcaatgtc
gcacgcccgaaacttgacgacgaccacctccgagcccccatctcggactcggagtcgtgg
gtcaacgaggacgcgaccgccgaaatcaagcgcacgctgtacgaggcaggctatccggtc
cgggacgaccgtgatcttgaaacgggcgacgccatcgagatggatttgcgcctgcgcctg
cgagactaccagcaggactgggtggagcggttcaccgaacagggctcgggcgtgttcgtc
ggcccgcccgggtcgggcaagaccgtcgccgcgatgggtgcgatggccgccatcggcggc
gagacgctgattctcgtcccctcgcgcgaacttgcgacacagtggcgcgacgaactggtc
cgacacacctccctgaccgacgacgatatcggcgagtaccacggtggtgaaaaggagata
cgcgccgtcactatcgccacctatcgaaccgccggaatggaccgccaccggaagctgttc
gaccagcgcaagtggggcctcatcgtcttcgacgaggtccaccacgtcccctcgccgatt
caccgccggagcgcggacctccagaccaaacaccggttgggattgaccgccacgccgacc
agagagagcgacgacgaggaggagatattcacgctcatcggtccgccaatcgggacggac
tggggcaaactgttcgacgagggctacgtcgccgaaccggaggtcgagatccgtctcgtg
ccgtggggggacgaaaccgaacagtccgagtacagttccacgtcgggccacgaccgccga
caggccgccgccagcaacaccggaaaaatcgacgagatacgctacgcgctggccgagaac
ccggccgcgaaggcgctagtgttcatcgagtacctcgaccagggtgaggctattagtgag
gccatcgatgcgccgtttatcagcggcgagacgccacacgcccgccgggagaagctgttt
gacgagttccgccgcggcgaactgaccacgctggtcgtctcccgcgtcggcgacgagggt
atcgacctgccggacgccgaactcgcgctcgtcgcttccggactgggtgggtcccgtaga
cagggcgcacagcgggccgggcggacgatgcgccccgctggtgacgcccggatggtcatt
ctcgcgacgcgagggacgaccgaggaggacttcgtccgtcgccagatgcgccacctcgct
tcgaagggcatccgcgtgaccgagacggaggccgaggccgtcgagccaccggcaaagacg
gagtga
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