KEGG   Haloarcula marismortui ATCC 33800: KDQ40_09545
Entry
KDQ40_09545       CDS       T07272                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hsin  Haloarcula marismortui ATCC 33800
Pathway
hsin03030  DNA replication
hsin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KDQ40_09545 (fen)
   03410 Base excision repair
    KDQ40_09545 (fen)
   03450 Non-homologous end-joining
    KDQ40_09545 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsin03032]
    KDQ40_09545 (fen)
   03400 DNA repair and recombination proteins [BR:hsin03400]
    KDQ40_09545 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsin04147]
    KDQ40_09545 (fen)
DNA replication proteins [BR:hsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    KDQ40_09545 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     KDQ40_09545 (fen)
DNA repair and recombination proteins [BR:hsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     KDQ40_09545 (fen)
Exosome [BR:hsin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   KDQ40_09545 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N DUF7387
Other DBs
NCBI-ProteinID: QUJ70970
UniProt: M0JYH9
LinkDB
Position
1867010..1867990
AA seq 326 aa
MGNADLRSLAALSDVSFDDLGGSVVAVDAHNWLYRYLTTTVKFTSESKYTTSNGEEVANL
IGVVQGLPKFFEHDMTPVFVFDGAVTDLKDDEVEKRREQRQKYESELEAAREAGDSTRVA
KLDSRTQRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDALL
FGAPMTLRQITSKGDPELMDFAATLEHHDLTWEQLVDAAILMGTDFNEGISGIGPKTAVK
DLHEHGDLYAVLAARGEHIDHADRIRDLFLDPAATDDYEIPDSIEPDIDAARTFVTDQWE
VDADEVARGFERIDDSVVQTGLDRWA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgctgatttgcggtcgctcgcggccctgtcggacgtgtcgttcgacgacctc
ggcgggagcgtcgtcgccgtggacgcccacaactggctctatcgctatctgacgacgacg
gtgaagttcaccagcgagtcgaagtacaccaccagcaacggcgaggaggtggcgaacctc
attggagtcgttcagggcttaccgaagtttttcgagcacgacatgacgccggtgttcgtt
tttgatggcgcagtcacggacctcaaagacgacgaggtcgagaagcgccgtgagcaacgc
cagaaatacgagtccgaactggaggcagcccgggaagcgggcgacagcacccgcgtcgcc
aagcttgactcccgcacgcagcggttgaccgacactatcgtcgacacgacgcgggacctg
ctggaactcctcgacgtgcctatcgtcgacgccccggcagaaggtgaggggcaggcgtcg
gtgatggcccggcgtggcgacgtagactacgtcggaacggaggactacgatgcgctgctg
ttcggcgcgccgatgacgctccggcagatcacgtcgaagggcgaccccgaactgatggat
tttgcggccacactcgagcaccacgaccttacctgggaacaactggtcgacgcggcgatt
ctgatggggacggacttcaacgagggcatctcaggtatcggccccaaaacagccgtcaaa
gacctccacgagcacggcgacctctacgcagtgcttgcggcccgcggcgaacacatcgac
catgccgaccgcattcgggacctgtttctcgaccccgcggccaccgatgactacgaaatt
ccggacagcatcgagccagacatcgatgccgctcgcacgttcgtcaccgaccagtgggag
gtcgatgctgacgaggtcgctcgcgggttcgaacgcattgacgactcagtcgtccagacc
ggactcgaccgttgggcgtga

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