Haloarcula marismortui ATCC 33800: KDQ40_09545
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Entry
KDQ40_09545 CDS
T07272
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03030
DNA replication
hsin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDQ40_09545 (fen)
03410 Base excision repair
KDQ40_09545 (fen)
03450 Non-homologous end-joining
KDQ40_09545 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsin03032
]
KDQ40_09545 (fen)
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_09545 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsin04147
]
KDQ40_09545 (fen)
DNA replication proteins [BR:
hsin03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
KDQ40_09545 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
KDQ40_09545 (fen)
DNA repair and recombination proteins [BR:
hsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
KDQ40_09545 (fen)
Exosome [BR:
hsin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KDQ40_09545 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
DUF7387
Motif
Other DBs
NCBI-ProteinID:
QUJ70970
UniProt:
M0JYH9
LinkDB
All DBs
Position
1867010..1867990
Genome browser
AA seq
326 aa
AA seq
DB search
MGNADLRSLAALSDVSFDDLGGSVVAVDAHNWLYRYLTTTVKFTSESKYTTSNGEEVANL
IGVVQGLPKFFEHDMTPVFVFDGAVTDLKDDEVEKRREQRQKYESELEAAREAGDSTRVA
KLDSRTQRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDALL
FGAPMTLRQITSKGDPELMDFAATLEHHDLTWEQLVDAAILMGTDFNEGISGIGPKTAVK
DLHEHGDLYAVLAARGEHIDHADRIRDLFLDPAATDDYEIPDSIEPDIDAARTFVTDQWE
VDADEVARGFERIDDSVVQTGLDRWA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgctgatttgcggtcgctcgcggccctgtcggacgtgtcgttcgacgacctc
ggcgggagcgtcgtcgccgtggacgcccacaactggctctatcgctatctgacgacgacg
gtgaagttcaccagcgagtcgaagtacaccaccagcaacggcgaggaggtggcgaacctc
attggagtcgttcagggcttaccgaagtttttcgagcacgacatgacgccggtgttcgtt
tttgatggcgcagtcacggacctcaaagacgacgaggtcgagaagcgccgtgagcaacgc
cagaaatacgagtccgaactggaggcagcccgggaagcgggcgacagcacccgcgtcgcc
aagcttgactcccgcacgcagcggttgaccgacactatcgtcgacacgacgcgggacctg
ctggaactcctcgacgtgcctatcgtcgacgccccggcagaaggtgaggggcaggcgtcg
gtgatggcccggcgtggcgacgtagactacgtcggaacggaggactacgatgcgctgctg
ttcggcgcgccgatgacgctccggcagatcacgtcgaagggcgaccccgaactgatggat
tttgcggccacactcgagcaccacgaccttacctgggaacaactggtcgacgcggcgatt
ctgatggggacggacttcaacgagggcatctcaggtatcggccccaaaacagccgtcaaa
gacctccacgagcacggcgacctctacgcagtgcttgcggcccgcggcgaacacatcgac
catgccgaccgcattcgggacctgtttctcgaccccgcggccaccgatgactacgaaatt
ccggacagcatcgagccagacatcgatgccgctcgcacgttcgtcaccgaccagtgggag
gtcgatgctgacgaggtcgctcgcgggttcgaacgcattgacgactcagtcgtccagacc
ggactcgaccgttgggcgtga
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integrated database retrieval system