Haloarcula marismortui ATCC 33800: KDQ40_09620
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Entry
KDQ40_09620 CDS
T07272
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_09620
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_09620
Prokaryotic type
Archaeal type
TFB
KDQ40_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
FtrD-like
Cyclin_N
Rcat_RNF216
Sigma70_r4
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QUJ70984
UniProt:
M0JYJ5
LinkDB
All DBs
Position
1882546..1883505
Genome browser
AA seq
319 aa
AA seq
DB search
MERPTRQRDSEQEEREEESESTGQQTCPECESESISSDGGGELVCEDCGLVIEDENIDRG
PEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVA
TACLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQELELKMEPVDPKQYVPRFAS
ELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIH
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccgacgcgccagcgggattctgaacaggaggaacgcgaggaggagtccgag
agcacgggccagcagacctgccccgagtgtgagtcggagtccatatctagcgacggcggt
ggtgaactcgtctgcgaggactgtggcctcgtcatcgaagacgagaacatcgaccgcggg
ccggagtggcgggcgttcaatcactccgaacgccagtccaagtcacgcgtcggagccccc
acgacccagacgatgcacgacaaggggctgaccacacagatcgactggaaggacaaggac
gcctacggtcggtcgctctcctcggagaaacggagccagatgcaccgccttcgaaagtgg
caggagcgcatccgaaccaaggacgccggtgaacggaacctgcagttcgcactgtcggag
atcgaccgcatggcgagcgcactcggtgtcccccggtcggtccgggaagtcgcctcggtc
atctatcgacgggcgctcaacgaggacctcatccgcggtcgctccatcgagggcgtcgcc
accgcctgcctgtatgcggcctgtcgacaggaaggcatcccccgcagtctagaggaagtt
tcggatgtctcccgggtcgaacagaaggagatcggccggacgtatcgctacgtcgctcag
gaactcgaactgaagatggaaccggtcgaccccaagcagtacgtcccgcggtttgcctcc
gagctggaactttctgaggaggtccagtcgaaggccaacgaaatcatcgacaccaccgcc
gagcaagggctgctctcgggcaaatcacccactggctacgccgccgcagccatctacgcc
gcttcgctgctgtgtaacgaaaagaagacccagcgcgaggtcgctgacgtggctcaggtg
acagaagtcaccatccggaaccggtatcaggagcagatcgaagcgatgggcatccactga
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