Haloarcula marismortui ATCC 33800: KDQ40_12185
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Entry
KDQ40_12185 CDS
T07272
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDQ40_12185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_12185
DNA repair and recombination proteins [BR:
hsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDQ40_12185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
HHH_2
HHH
UVR
GIY-YIG
5_3_exonuc
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QUJ71457
UniProt:
M0JX68
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Position
2354882..2356627
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AA seq
581 aa
AA seq
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MDADEVRERAGSLPREPGVYLFEQGRDDKRRVLYVGKAVDLRDRVRSYADPRSERIAKMV
ERAETIDFAVTDTETQALLLEANLIKRHRPPYNVRLKDDKSYPLVQLTDHPVPRIEVTRD
PADGATVYGPFTDKGRVETVVKALREAYGLRGCSDHKYSNRDRPCLDYEMGICTAPCTGE
IGEADYAEDAEAVTRYFEGETGVLADPLRREMEAAAQNQEFERAANLRDKLGAVEALHGE
GDTAVSDSGGYQTTDVLGAAIEGERAIVARLHAEGGKLVERDRHTLEAPDGEGTAGVYRA
FIPQYYAERELPDRILCAEAPADPDIEAWLESEGVTLGVPGAGREATLVDLALKNARQRG
GTDDESGRLADALGIDHPSRIEGFDVSHAQGRSAVGSNVTFVDETPEKSDYRRKKLTEQN
DDYANMRELLRWRATRAVEGRDDRPDPDLLLIDGGDGQLGAARDALAETGWDVPAIALAK
DEELVITPDRVYDWNDDAPQLHLLQRVRDEAHRFAVQYHQTLRDEVSTTLDDVPGIGPET
RKRLLRRFGSVDSVRAASDEELTAIDGIGEQTAETIRTRLQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacgaggttcgagagcgcgcggggtcgttgccacgggagcccggcgtgtac
ctgttcgaacagggccgggacgacaaacgccgggtcctctacgtcgggaaggccgtcgac
ctgcgcgaccgcgtgcgctcctacgccgaccctcgcagcgaacgcatcgccaagatggtc
gaacgggccgaaaccatcgacttcgccgtcaccgacaccgaaacacaggcgctgttgctc
gaagcgaacctcatcaagcgacaccggccgccgtacaacgtccggctgaaagacgataaa
tcctacccgctggtccagctaactgaccatccagtcccccgaatcgaggtgacgcgcgac
cccgcggacggcgcgaccgtctacgggccgttcaccgacaaaggacgggtggaaacagtg
gtgaaggccctgcgggaagcgtacggcctgcgaggctgttccgaccacaagtacagcaac
cgggaccggccctgtctcgactacgaaatgggcatctgtaccgcgccctgtaccggcgaa
atcggcgaagccgactacgccgaggacgccgaagcggtcacgcggtacttcgagggtgaa
accggtgttctggcggacccgttgcgccgcgagatggaggccgctgcacagaaccaagag
ttcgaacgcgccgcaaacctccgggacaagctcggggccgtcgaggcgctccacggagag
ggagataccgccgtcagcgactctggggggtatcagacaacagacgtgctcggggctgcc
atcgagggcgagcgcgccatcgtcgcccggctccacgccgagggcggcaagctcgtcgaa
cgggaccggcatacactcgaagcaccggatggcgaagggactgccggcgtgtaccgggcg
ttcatcccgcagtactacgccgagcgagagctccccgaccggattctctgtgccgaggcc
cctgccgacccggacatcgaagcgtggcttgagagcgagggcgtcacgctcggcgtgccc
ggggccggtcgggaagcgacgttggtcgacctcgcgctgaagaatgcccgccagcgcggt
gggaccgacgacgagagcggtcgtctggccgatgcactgggtatcgaccacccgagccgt
atcgagggcttcgatgtgagccacgcccaaggacggtcggctgttggctcgaacgttacg
ttcgtcgacgaaacgccagagaagagtgattatcggcggaagaagctcaccgagcaaaac
gacgactacgcgaatatgcgggaactcctccgctggcgggctacgcgtgccgtcgaaggg
cgggacgaccgacctgatccggatctgctactcatcgacggcggcgacggccagctcggg
gcggctcgcgacgcactcgccgagaccggctgggacgtgccggccatcgcgctcgcgaag
gacgaggaactggtcatcacacccgaccgcgtgtacgactggaacgatgacgccccgcaa
ctccacttgctccagcgggtgcgtgacgaagcccatcgctttgccgtccagtaccaccag
acactacgtgacgaggtgtcgacgacgcttgacgacgtgcccggcatcggccccgaaacg
cggaaacgactgctccgacgcttcggtagcgtggacagcgtcagagcggcctccgacgaa
gaactgacggctatcgacggtatcggcgagcaaaccgcggagacgattcggactcggcta
cagtaa
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