Haloarcula marismortui ATCC 33800: KDQ40_12685
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Entry
KDQ40_12685 CDS
T07272
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDQ40_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_12685
Enzymes [BR:
hsin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KDQ40_12685
DNA repair and recombination proteins [BR:
hsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDQ40_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QUJ71542
UniProt:
M0K2W7
LinkDB
All DBs
Position
complement(2460637..2461224)
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AA seq
195 aa
AA seq
DB search
MEQMDGLDVVGCERCDDLCGSRSRIVNGVGPADADLLFVGEAPGANEDEQGEPFVGRSGD
VLDAGLRDAGLDRGDVRITNCVRCRPPDNRDPRNGELANCRDYLETEIDRVDPEVVVTLG
KVPAEHLLERDVAVTGEAGDVFDVAIAGQPRRVLVSVHPAATLYDPSQKETFEAALTTAA
EFTDAQSGQSRLGEF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggacggcctcgatgtcgtcggctgtgagcgctgtgatgacctctgtggc
tcgcgctcgcgcatcgtcaacggcgtcggccccgcggacgcggacctgctgttcgtcggg
gaagcccccggcgcgaacgaggacgaacagggcgagccgttcgtcggccggagcggcgac
gttctcgacgctgggttacgcgatgccggcctcgaccgcggcgacgtgcgcatcacgaac
tgcgtccgctgtcgcccgccggacaaccgcgacccccgaaacggtgaactcgcgaactgc
cgcgactatctggagacggaaatcgaccgtgttgaccccgaagtcgtcgtgacgctcggg
aaagtgccggccgagcacctgctagagcgtgatgtcgccgtcaccggcgaagcgggcgac
gtgttcgacgtggctatcgccggccagccacggcgcgttctcgtctccgttcacccggcg
gcgacgctgtacgacccgagccagaaagagacgttcgaggcggcgctgacgactgccgcg
gagtttaccgacgcccagagcggccagtcacgactcggcgagttttaa
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