Haloarcula marismortui ATCC 33800: KDQ40_13420
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Entry
KDQ40_13420 CDS
T07272
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_13420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_13420
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_13420
Prokaryotic type
Archaeal type
TFB
KDQ40_13420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
RB_B
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
QUJ71677
UniProt:
M0K3A1
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All DBs
Position
2589901..2590761
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AA seq
286 aa
AA seq
DB search
MSTTVTQCPECNGSVKQQGVESVCGSCGLVVGEDAIDPGPEWRSFEDDDTDRARTGAPLT
RSRHDRGLSTKIGRSTRLKGRKRRQFARLRREHNRAQISSKRERNKVYAFTEIRRIISSM
ALSDAIRDRACVLFESAQNEDLLQGRTLEGFAAAAIYATCRTEGVARTVDELCTVAKATQ
AELRAAYDALNRELGLPTGPIDPREYVPRFATTLDLPTAVRQRAEQLVDEAQDRGLVSGR
NPAGVAAACLYTAAQEQDVALTQAEAAETADVTPVTLRGTYTELQE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgacggtaacgcaatgtccggagtgtaacgggtcagtcaaacaacagggcgtc
gaatcggtctgtggcagctgtgggctggtcgtcggcgaggacgccatcgaccccggcccg
gagtggcggtcattcgaggatgacgacaccgaccgggcacgcacgggcgcgccgctgacg
cggtcgcgtcacgaccgcgggctctcgacgaagatcggccggtcgacacggctgaaaggg
cgcaagcggcggcagttcgcccgcctccggcgcgagcacaaccgcgcccagatcagctcg
aaacgcgagcgaaacaaggtgtacgccttcaccgagatccgacgtatcatcagctcaatg
gcgctttcagacgcgattcgggaccgggcctgtgtgctgttcgaatccgcacagaacgag
gatctgctgcagggacggacgctggaagggtttgcggccgcagccatctacgccacctgc
cggaccgaaggtgttgcccggaccgtcgacgaactctgtaccgtcgccaaggcgacacag
gcggaactccgcgcggcctacgacgctctgaacagggagctcgggctgccgaccggtccg
attgacccacgcgagtacgtccctcggttcgcgacgacgctggacctgccgacggcggtc
cgccagcgcgcggaacagctcgtcgacgaggcacaggaccgcgggctggtcagcgggcgc
aatccggccggcgtcgcagcggcgtgtctctatactgcggctcaggagcaggacgtggca
cttacgcaggccgaagcggcagagacagcggacgtaacgccggtcacgctacgcgggacc
tacaccgagctacaggaatag
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