Haloarcula marismortui ATCC 33800: KDQ40_13485
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Entry
KDQ40_13485 CDS
T07272
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hsin
Haloarcula marismortui ATCC 33800
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsin03019
]
KDQ40_13485
Messenger RNA biogenesis [BR:
hsin03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
KDQ40_13485
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Zn_Ribbon_YjdM
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
QUJ71688
UniProt:
M0JZJ6
LinkDB
All DBs
Position
complement(2605902..2607947)
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AA seq
681 aa
AA seq
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MSQQAAQVETLFLHEHGEEFRVAAHRDGERLFHGILELKETDAGPRPRRLRVKDGTSEEL
RSPDQFVDLARRAARIRISEQTAPLARDRVREMLDAYQVEAKVVRTCRLCASDGRYSPIT
SETAIETDDETICPECARQQLDRELAFKGSISGDARDRLEELLLEVQDLDRVTNLLSGQL
DPDLTKFDEISATVDEVDPVRVDSLDLHPGMQDHLESRFDTLLPVQSLAVEHGATEGRDQ
LVVSATATGKTLIGEMAGIDRVLNNKGTMLFLVPLVALANQKYEQFQDRYGDMVDVSLRV
GASRIADEGGRFDPEADVIVGTYEGIDHALRTGKDLGTVGTVVIDEVHTLGEDERGHRLD
GLISRLKYYCESGGAPDSGDTQWIYLSATVGNPGQLADQLRATLIEFEERPVPIERHVTF
ADGREKIETEKKLVKRAFDNKSSKGYRGQTIIFTNSRRRCHQISRKLEYSSAPYHAGLDN
RKRQRVERQFADQDLAAVVTTAALAAGVDFPASQVIFDSLAMGIEWLTVQEFSQMLGRAG
RPDYHDKGTVYMLVEPDCSYHNSMEMTEDEVAFKLLKGEMEPVITRYDEGAAVEETLANV
TVAGKQAKRLNDRMVGEVPTKHALGKLLEYEFIDGLSPTPLGRAVTRHFLAPDESFQLLD
GIRKGQHPYEIVADMELRDEH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcaggccgcacaggtagagaccctgttcctccacgaacacggcgaggagttc
cgcgtcgccgcccaccgggacggcgagcggctcttccacggaatcctcgaactgaaagag
accgacgccggcccccgcccgcgtcggctccgtgtcaaggacgggaccagcgaggagctt
cgctcgcccgaccagttcgtcgacctcgctcgccgtgcggcccgcattcgtatttcagaa
cagaccgcgccgctcgcccgcgaccgcgtccgcgagatgctcgacgcgtatcaggtcgag
gccaaggtcgtccggacctgtcggctgtgtgcctccgacgggcgttactcgccgattacc
agcgagactgctatcgagaccgatgacgaaaccatctgtccggagtgtgctcgccagcaa
ctcgaccgcgaactcgcgttcaaagggagcatcagcggcgacgctcgcgaccggctcgaa
gagctgctactggaggtgcaggacctcgaccgggtgacgaacctcctgtcgggccaactg
gacccggacctgacgaagttcgacgagatttcggccaccgtcgacgaggtcgaccccgtt
cgcgtcgattcgctggacctccatcccgggatgcaggaccatctcgaatcgcggttcgat
acactgctgccggtccagagcctcgccgtcgagcacggagccacggagggccgcgaccag
ctcgtcgtgagcgcaacggcgacggggaaaacgctcatcggcgaaatggccggcatcgac
cgcgtcctgaacaacaaggggacgatgctgtttctcgtcccgctggtcgcccttgcgaac
cagaaatacgagcagtttcaggaccgctacggcgacatggtcgacgtgtcgctgcgcgtt
ggcgcgagccgcattgctgacgaaggcgggcgcttcgaccccgaagccgacgttatcgtc
gggacctacgagggcatcgaccacgcgctccggaccggcaaggacctcggcactgttggg
accgtcgtcatcgacgaggtccacacgctcggggaggacgagcggggccaccggctcgac
gggctgatttccagactcaaatactactgcgagtccggtggcgcaccggatagcggcgac
acgcaatggatctatctctcggcgacggtcggcaaccccggacagctggccgaccagctc
cgggcgacgctcatcgaattcgaggagcgaccggttccaatcgagcgccacgtcacgttc
gccgacggccgcgagaagatcgagaccgaaaagaagctcgtcaagcgggcgttcgacaac
aaatccagcaaaggctatcgcggccagactatcatcttcacgaactcccggcggcgctgt
caccagatttcacgcaaactggagtacagttctgcgccgtaccacgccggactggacaac
cggaagcgccagcgggtcgagcggcagttcgccgatcaggacctcgcagcggtcgtgacg
acggcggcgctggctgccggagtcgacttccccgcctcgcaggtcatcttcgactcactg
gcgatgggtatcgaatggctcacagtccaggagttcagccagatgctcggccgggccggc
cgcccggactaccacgacaaggggaccgtctacatgctggtcgagcctgattgttcgtac
cacaacagcatggagatgaccgaagacgaagtggcgttcaagctgctgaaaggcgagatg
gagccggtcatcacccgctacgacgagggcgcagccgtcgaagagaccctggctaacgtc
accgtcgccggcaagcaggccaagcggctcaacgaccggatggtcggcgaggtgccgacg
aaacacgcgctggggaaactgctcgaatacgagtttatcgacggcctctcgccgacgccg
cttggccgggctgtgacccggcatttcctcgcgcccgacgagtctttccagttgctcgac
ggcatccgcaagggacagcatccctacgaaatcgtcgccgacatggaattacgcgacgag
cactga
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