Haloarcula marismortui ATCC 33800: KDQ40_15155
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Entry
KDQ40_15155 CDS
T07272
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDQ40_15155 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_15155 (rpoB)
Enzymes [BR:
hsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDQ40_15155 (rpoB)
Transcription machinery [BR:
hsin03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
KDQ40_15155 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_TOP3B
Zn_ribbon_NOB1
Zn_ribbon_NUD
McsA
Motif
Other DBs
NCBI-ProteinID:
QUJ72007
UniProt:
M0K4S3
LinkDB
All DBs
Position
2927352..2929178
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AA seq
608 aa
AA seq
DB search
MSQGREAKVYVNGSLVGTHPDPEQLAEQVRQARRRGDVSQMVNVSVKNRTGEVIINADAG
RARRPLLVVEDGEPLMTDEEVEQVKEGELEFEELVERGLVEFIDAEEEEDILVGVDEGEL
TDNHTHLEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTRQH
LLHYPQLSMVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNQGSVDRALARSH
FFRTYEGEERRYPGGQEDRFEIPDDEVRGARGEEAYTHLDDDGLVNPETKVGENAVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHIAPQEDMPFTEEGVVPDLIINPHALPSRMTVGHILEMIGGK
VGALEGRRVDGTAFTGEDEDELRGSLEEHGFDSSGKETMYSGVTGEKIDAEIFVGDIFYQ
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLD
ESDREWINVCGQCGMTAVENVEQRRIYCPNCEEETDIHEVEMSYAFKLLLDEMKALGIAP
RIELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagggacgcgaagccaaagtatacgtaaacggtagtctggtcggcacacacccc
gacccggaacagctcgcagaacaggtacgacaggcgcgacgacggggggacgtctcccag
atggtcaacgtctcggtcaagaaccggaccggggaagtcatcatcaacgccgacgccggc
cgtgcccgacgcccgctgctggtcgtcgaggacggcgagccgctgatgaccgacgaggag
gtcgagcaggtcaaagagggcgaactcgaatttgaggagctcgtcgaacgcggcctcgtt
gagttcatcgacgccgaggaagaggaggacatcctcgtcggtgtcgacgagggcgaactc
accgacaaccacacgcacctggaagtcgacccgcagctgatgttcggtatcggtgccggg
atgattccctaccccgaacacaacgcctcgccccggattacgatggggtcggggatgatc
aagcagtcgcttggcctgccgtcggcgaactaccgcattcgcccggacacgcgccagcac
ctgctgcactacccgcagctgtcgatggtcaagacccagaccaccgaacagatcggctac
gacgaccgccccgcggcacagaacttcgtcgttgccgtcatgagctacgaggggttcaac
atcgaggacgcactcgtgatgaaccaggggtcggtcgaccgcgcgctcgcccgttcacac
ttcttccgtacctacgagggcgaggaacggcgctaccccggcggtcaggaggaccgcttc
gagattcctgacgacgaggttcgtggcgcacgcggcgaggaagcgtacacgcacctcgac
gacgatggcctcgtcaaccccgaaacgaaggtcggcgagaacgccgtcctgctcggcaag
accagcccgccccggttcctcgaagagccggacgacatgggcggtctctcaccgcagaaa
cgtcgggagacgagcgtgacgatgcgctcgggcgaatccggcgtcgtggacacggtcacg
ctaatggaaggcgaggacggctcgaaactttcgaaggtctctgtgcgtgacgagcgcatc
cccgaactcggggacaagttcgcgtcacggcacggccagaagggtgtcgtcggccacatc
gccccgcaggaggacatgcccttcaccgaggagggtgtcgtcccggacctcatcatcaat
ccgcacgcactgccgtcgcggatgaccgtcggccacatccttgagatgattggcggaaag
gtcggtgcgctcgaaggccgccgcgtcgacggtaccgccttcaccggcgaggacgaggat
gaactccgtggctcgcttgaagagcacggcttcgactctagcggcaaggagacgatgtac
tccggtgtgaccggtgagaagatcgacgcggagatcttcgtcggcgatattttctaccag
aagctgtaccacatggtctcgaacaagctgcacgcccgttcgcgcgggccggtgcaggtc
ctcacccgccagccgaccgaggggcgcgcccgcgaaggtggcctgcgtgtgggtgagatg
gaacgggacgtgctcatcgggcacggtgcggcgatggcgctcaaggagcgcctgctcgat
gagtccgaccgcgagtggatcaacgtctgtggacagtgtgggatgaccgccgtcgagaac
gtcgagcaacggcgcatctactgtccgaactgcgaggaggagaccgacatccacgaggtc
gagatgtcctacgcgttcaagctcctactcgacgagatgaaggcgctcggaatcgccccg
cggatcgaactggaggacgcagtatga
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