Haloarcula marismortui ATCC 33800: KDQ40_15575
Help
Entry
KDQ40_15575 CDS
T07272
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03030
DNA replication
hsin03420
Nucleotide excision repair
hsin03430
Mismatch repair
hsin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDQ40_15575
03420 Nucleotide excision repair
KDQ40_15575
03430 Mismatch repair
KDQ40_15575
03440 Homologous recombination
KDQ40_15575
03460 Fanconi anemia pathway
KDQ40_15575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsin03000
]
KDQ40_15575
03032 DNA replication proteins [BR:
hsin03032
]
KDQ40_15575
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_15575
Transcription factors [BR:
hsin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
KDQ40_15575
DNA replication proteins [BR:
hsin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
KDQ40_15575
DNA repair and recombination proteins [BR:
hsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
KDQ40_15575
MMR (mismatch excision repair)
KDQ40_15575
DSBR (double strand breaks repair)
HR (homologous recombination)
KDQ40_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SHLD2_OB1
Peptidase_inhib_put
Motif
Other DBs
NCBI-ProteinID:
QUJ72084
UniProt:
M0K2Q8
LinkDB
All DBs
Position
3012147..3013613
Genome browser
AA seq
488 aa
AA seq
DB search
MGAIEDIYEDLETDVPEEEFREAVEEKVEQMGGLADEETAAMLLAHELNENEVNAIADIE
PGMDEVKFLAKVMAIGDLKTFERDDEDEDGRVINVEAADESGSLRLAFWDGQAVDIDEGQ
LEVGDVLRVKGRPKDGYNGLEVSVDKAEPDEDATIDVEPGAGSSIDALTMGQSDVTLRGL
VLDTDSIRTFDRDDGSEGRVSNLTLGDETGRIRVTLWDDRADRADELDAGAAVEIIDGYV
RERDGSLELHVGDQGAVDEVEDDVAFEPDADPIAEVELEETADIAGVVRSADPKRTFDRD
DGSEGQVRNVRIQDATGDIRVALWGDKADKDIAPGDEVLAADVEIQDGWQDDKEASASWN
STIVVLDDGADLATGGAGGGASAETTDAEHAGLSSFGDEGDDTDADSSGNEAAAVSAGTG
DTSPDGGAQSAGQQVEFTGTVVQTGDPVVLDDGEQTMSVETGERVQLGQEITVRGELRDD
RLHAEDVF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgatagaggacatttacgaggacctagagacggacgtccccgaggaggagttc
cgcgaggccgtcgaggagaaggtcgagcagatgggagggctcgccgacgaggagacggcc
gcgatgctgttggcccacgaactcaacgagaatgaggtcaacgccatcgccgatatcgaa
cctgggatggacgaggtcaaattcctcgccaaggtgatggccatcggcgacctgaaaacc
ttcgaacgcgacgacgaggacgaagacggccgggtcatcaacgtcgaggccgccgacgag
agcggcagcctcaggctcgctttctgggacggacaggccgtcgacatcgacgaggggcaa
ctggaggtcggcgacgtgctccgggtcaagggccggccgaaggacggctacaacgggctt
gaggtgtccgtcgacaaggcagagccggacgaggacgccacaatcgacgtggagccgggc
gctggctcgtccatcgacgcgctgacgatgggacagtccgacgtgacgctgcgcgggctc
gtgcttgataccgattcgattcggacgtttgaccgcgacgacggtagcgagggccgcgtc
tcgaacctcacacttggcgacgagacggggcgcatccgggtgacgctgtgggacgaccga
gccgaccgcgccgacgaactcgatgcgggcgcggccgtcgaaataattgacggctacgtt
cgggagcgggacggctcgcttgaactccacgtcggcgaccagggggccgtcgacgaagtg
gaagacgacgtggcctttgagcccgacgccgacccaatcgcagaggtcgaactcgaagag
acggccgatattgctggcgtcgtgcgctcggccgaccccaagcggacgttcgaccgcgac
gacggcagcgaggggcaagtccggaacgtccgcattcaggacgccaccggcgacatccgc
gtggcgctgtggggcgacaaggcggacaaggacattgcaccgggggacgaggtgctcgcg
gccgatgtcgaaattcaggacggctggcaagacgacaaggaagcgtcggcaagctggaac
tccacgattgtcgtgcttgatgacggtgcggatctggcgactggtggcgcaggcggggga
gccagcgccgagacgaccgacgccgaacacgctggcctatcctccttcggcgacgaaggg
gacgacactgacgctgatagcagcggcaacgaggcggccgctgtcagcgccggcaccggc
gacacgtcaccggacggtggcgcacagagtgccggccagcaggttgagttcaccggcacc
gtcgtccagactggcgaccccgtcgtactcgacgacggtgagcagacgatgagcgtcgaa
accggcgagcgcgtgcagttagggcaggaaataactgtccgtggggaactccgtgacgac
cggcttcacgctgaggacgtgttctga
DBGET
integrated database retrieval system
