Haloarcula sinaiiensis: KDQ40_16055
Help
Entry
KDQ40_16055 CDS
T07272
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hsin
Haloarcula sinaiiensis
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsin03000
]
KDQ40_16055
Transcription factors [BR:
hsin03000
]
Prokaryotic type
Helix-turn-helix
Other families
KDQ40_16055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS_4
PAS
PAS_3
BAT
PAS_8
GAF_2
HTH_10
GAF_3
GAF
PAS_7
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
QUJ73829
UniProt:
M0JTG4
LinkDB
All DBs
Position
pHsi117:complement(6048..10502)
Genome browser
AA seq
1484 aa
AA seq
DB search
MTPTSEPLRVFALGGRDIASELDEETTAAGRPLTTTTHPPDDLNGSVDPDCLLVDQRELN
GWRPVVDRATDTFPSVPVVVLIATAAEDAVATAIERGATSTLPRSVCTTEPDAAATHVGR
LVNGDGDSTAQETGPGIESDDRLQLVADNVDEIIYVANWDFSEVEYVNPAYEAIWGRPVE
QLYDDATAFIEGIDPRDREEFEADFEAMRADIRNGTPEESYGFEFRVRQPDGEIRWVTAT
GYPVTTETGKKRYVGIVEDVTDSRELERTYRELFESISDGIVVHDPETGKIVDVNEQFCA
MNGYDREELLGETVELITPDDSANSYDSAREKVKLAAEEGSQLFEWRNERKSGETFPVEV
SLRLARLQGEQRVLASVRDITERRERQSQLETERDRWSVLFENTPDPIMGVKFVDGDPYI
TEVNEAFETAFGTEAADITDHPIADAIVPDDEREGYEEIRRQALAGEPVEREVRREAADG
VRDFLLRVLPFESGGDRHAYVWFTDVTERRERERAIDEERQKYSTLVEQSTDGVVVVRNG
EYVFVNERFTEITEYDEGELLGMPVERVFAPESRELIRDRYERRVAGESPPNQYDVEVET
ATGEHRTLELAVSRLQHEGDPATMATFRDVTDRKERERTVKQLQVATERLQGVETTEAVF
DIAVETARDVLGLPMTACWRYDDEHDRLTYTAGTEPVEAMETGPVSFTPADEEYEVFQAS
EPTTYDPSEHHSHNPLEQSIIVPVGDDGLLAAGERGRQEYEQYLIDVMGVLAGHAASAIG
RVQRAEQLRESERRLGAIIDRIDEAIFLAPAAELTNSDPTAEFVSSGYEDIWGQSLERIQ
ETHDEGFFSTLHPKDRDDYRSLVEEIVADVERGEPRDRYTREYRIERPDGERRWVQSEFY
PTAWPDGNPRIIVASRDVTDRKEREQTLETFHDATNELTTAETAAEASITAVEAAASVFD
LPATAVYRYDGETGRLDPAASGPELPPATDLGSLGTEHDAAWGAFVDEQLRRVDNAADAL
TDDLPDGGALLFPLGGNGLLTVWQSDETLDTDAANILAATLEAALNRLRGERRLESRRAE
LEAQTERARRLESITDLTQRVEAAITTRSSREGIQESVCAELTDVEPFEAACVVEADIGS
DRLQPRAFAGIGRDDIEDLLIDTAGDASPAAQAWGTEEPVVSNDLVGSRQQEGWRKRLLR
DGIGSVCAVPLSYEDVIHGVLTIFADEPDAFGERTVDVLSQLGASIGYAITATERRRALE
SDDTLELEFRGQNTDLPMARLARALECRVSHQRTVHRQDSSISVYYRLTGDVPSEVAETA
RTVLPGDMTIVSRGADEVVLERRGSSWFGSYVSEHGGIIRRARRTAEGVTLVVEIPTETD
TRTMVERIQNEFSDLELYAQRQHRETNQTAREIQDRLERELSERQYEALETAQAMGYFEW
PRENSGEDVADALGITQPTLNKHVRLGERTVFDILFGSGDGIEP
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaccagcgaaccactgcgagtgttcgcgctggggggccgtgatatcgcttcg
gaactcgacgaagagacaactgccgccgggcgaccactcacgaccacgactcacccgcca
gacgacctgaacggcagtgttgaccccgactgccttctggtcgatcagcgagagttgaat
gggtggcgtcccgtcgtagacagagccaccgacaccttcccatcggttccagtcgtcgtt
ctcattgcgaccgctgcagaagacgcggtggcgacggccatcgagcgcggtgcgacaagc
acccttccgcggtcggtgtgtaccactgagccagatgccgccgcaacccacgtcggccgc
ctcgtgaacggcgacggagacagcacagcacaggaaacaggccccggcatagagtcggac
gaccgactgcaactcgtcgccgacaacgtcgatgagatcatttatgttgcgaactgggac
ttctccgaggtcgagtatgtcaaccccgcctacgaggcaatctgggggcgaccggtcgaa
cagctttacgatgacgcgacggcattcatagaagggattgacccacgggaccgcgaggaa
ttcgaggctgatttcgaggcgatgcgcgcggacatccgaaacggaacgccagaggagagc
tacgggttcgagttccgagtccgccagccggacggagagataaggtgggtaacggcgaca
ggctatcccgtgacaacggagacgggcaagaagcgatacgttggaatcgttgaggatgtc
accgacagccgtgaactagagcggacgtatcgcgagcttttcgagagcatctccgacggc
atcgtcgtccacgaccccgagacgggcaaaatcgtcgatgtcaacgagcagttctgtgcg
atgaacggctacgaccgcgaggaattactcggtgagaccgtcgaactaatcacgccggac
gacagtgcgaactcctacgacagtgcgagagagaaggtcaaactggcagccgaggagggg
tcacagctgttcgagtggcgcaacgaacggaagtccggggagacgttccctgtcgaagtg
agtctgcgactcgcgaggctgcagggcgaacagcgggtgcttgcgagcgttcgtgacatt
accgagcgtcgggaacgacagtcccaacttgagaccgaacgcgaccgctggtcggtcctg
tttgagaacacgccggacccgatcatgggcgtcaaattcgtcgacggcgacccgtatatc
accgaggtcaacgaggcgttcgagacggcattcgggaccgaggccgcggacatcaccgac
caccctatcgcggacgcaatcgtcccggacgacgaacgtgaggggtacgaggagattcgc
cgacaggcactagccggcgaacccgtcgagagggaggttcgtcgggaggccgccgatggt
gtcagggacttcctgctcagagtgctcccgtttgagagtgggggtgatcgccacgcctac
gtctggttcaccgatgtcacagagcgccgagagcgcgagcgggctatcgatgaggagcga
cagaagtattcgacgctggtcgaacagagtacagacggagtcgtcgtggtccggaatggc
gagtacgtcttcgtcaacgagcggttcacagaaatcaccgaatacgacgagggcgaactg
ctggggatgcccgtcgagcgggtgttcgccccggagtctcgcgagctgatccgggaccga
tacgaacgccgggtggcgggtgagtcgccgccgaaccagtacgacgtcgaagtggagacg
gcgacgggcgagcaccggacgctggagttggccgtctcgcgcctccagcacgagggcgac
cccgctacaatggcgaccttccgcgacgtgaccgaccggaaagagcgcgaacggaccgtc
aagcaactccaagtcgccaccgagcgcctacaaggcgttgagacgaccgaggcggttttc
gatatcgccgtcgagacggcacgggatgtcctcgggctgccgatgaccgcgtgctggcgg
tacgatgacgagcacgaccggctcacgtacaccgccggaactgagccagtcgaagcgatg
gagactggcccggtttcgtttacgccggcggacgaagagtacgaggtcttccaagccagt
gagccgacgacgtacgacccaagcgagcatcactcacacaacccgctcgaacagtccatc
atcgtcccggtcggtgacgacgggcttctcgcggccggcgaacgtggccgacaggagtac
gaacagtacctcatagacgtgatgggcgtcctcgcaggccacgcggcgagtgcgatcggg
cgtgtccagcgggccgaacagctccgcgagagcgagcgcagactcggtgccattattgac
cggatcgacgaggcgattttcttggcgccggccgccgagttgactaacagcgaccctacc
gcggagttcgtcagttcggggtacgaagatatctggggccagtccctcgaacgcattcaa
gagactcacgacgagggcttcttttcgacactgcatcccaaggaccgggacgactaccgg
tcgctcgtcgaggaaatcgtcgccgacgtggagcgcggtgaaccacgagacaggtacaca
cgcgagtaccgcatcgagcggcccgacggcgaacgccggtgggtccagtcggagttctac
ccgacagcgtggcccgacggcaacccgcgaatcatcgtcgcgagtcgagatgtgaccgac
cgcaaggagcgcgagcagacgctggagaccttccacgatgcgaccaatgaactgacgacc
gccgaaacggccgccgaagccagcatcacggcagtcgaggcggcggcgagcgtcttcgac
ctgccggcgactgccgtctatcgatacgatggcgagaccggccgtctcgatccggccgcg
agcggtccggaactgccaccggcaacggatctcggctcgctcggaacggagcacgatgcc
gcctggggggcgttcgtcgacgagcaactgcgacgtgtcgacaacgctgctgacgcactt
acagatgaccttccggatggcggcgcactgctcttcccgctgggtgggaacggtcttctc
acagtgtggcagtccgacgaaaccctcgatacggacgccgcgaacattctggcagcgacg
ctggaggctgccctcaacagactccgcggcgaacggcgacttgagtcgcggcgtgccgag
ctcgaagcccagaccgagcgggcacgcagactggagtccatcacggatctcacacagcgc
gtcgaagcggccattacgacgcggtcctcccgcgaagggattcaggagtctgtctgtgcc
gaattgacggatgtcgaaccgttcgaagctgcctgcgtggtcgaagccgacatcgggtcg
gaccgcctccagccacgtgctttcgccgggatagggcgcgacgatatcgaggaccttctg
atagacacagccggagacgcgagcccggcagcccaagcctgggggactgaggaacccgtg
gtcagcaacgacctcgtcggtagtcgacaacaggagggctggcgcaagcgactgctccgc
gatggtatcggatctgtctgtgccgtcccgctgtcctacgaggatgtcatccacggcgtg
cttaccatcttcgcggacgaacctgacgcattcggagagcgcacggtcgacgtcctctct
cagttaggtgcttccatcgggtacgccattacagcgacagagcggcggcgtgcgctcgaa
tccgacgacacgctcgaactcgagttcaggggccaaaacaccgacctcccgatggcgcgg
ctagcacgggcgcttgagtgtcgggtcagccatcagcggacggttcatagacaggatagc
tcgatcagcgtctactaccggctcactggtgacgttccgtcggaggtggccgagacggcg
agaactgtccttcctggagatatgacgatcgtttcccggggggccgacgaagtagttctc
gaacggcgtggctcctcgtggttcgggtcgtacgtctcggagcacggtggtatcattaga
cgcgcacgccgaaccgccgagggggtcacgttggtcgtcgaaatcccgaccgagacggat
acgcgaaccatggtcgaacgcatccagaacgaattttcggacctagaactgtacgcacag
cgccagcaccgcgagacgaaccagaccgctagagagatacaggaccggctggaacgagag
ctaagcgagcgacagtacgaggctctagagacggcacaggcgatggggtacttcgagtgg
ccccgcgagaacagcggcgaagacgtcgccgacgcgctggggattacgcaaccgacgttg
aacaaacacgtccgactcggcgagcggacggtgttcgatatcctgttcgggtccggtgac
gggatagagccgtga
DBGET
integrated database retrieval system
