Haloarcula marismortui ATCC 33800: KDQ40_17235
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Entry
KDQ40_17235 CDS
T07272
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KDQ40_17235 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsin03400
]
KDQ40_17235 (xseA)
Enzymes [BR:
hsin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KDQ40_17235 (xseA)
DNA repair and recombination proteins [BR:
hsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KDQ40_17235 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
TOP_N
RecJ_OB
DUF2721
T2SSF
Rho_Binding
Motif
Other DBs
NCBI-ProteinID:
QUJ74199
UniProt:
M0JME4
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All DBs
Position
pHsi540:144557..145768
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AA seq
403 aa
AA seq
DB search
MGSGPELTQTSLETLQEALQTERITYVDTLNEDIGAVVESADQLAFDYVVGDVSDYGVSS
NDHVHLDLVHEGSTIHCVLFGYKRSAIDATIEDGMQVAVKGSLSYYEDGGNVSVIVEDIV
EVGEGTYQRIYEQNRQLLDSDGLLDPEHKQALPDFPERIGIATSATSDARMDAITSIHER
YPDVDIVIQNTSVQGDDAMMSIMGAISELDDDPRVDVIVLTRGGGSDKHLRVFNETPLCR
VIHKTETPVVVGVGHENDRTLADEVADRRVMTPTEVGNIVPERTTLDAELETLEERLNTA
YTETAETTLETMDDRLTRAYRRTVESDLSAFEAELDRTYDTHVRDELTDLANRLEQARTQ
YDQQRKREQEVAAHRRQRRRLLLILVALGLLVVALLLYILLPL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggggccggagttgacgcagacatcgctggagacacttcaggaagcactccaa
acggagcgaattacctacgttgatacgctgaatgaagatatcggcgcagttgttgagagt
gcagaccagcttgccttcgattacgtcgtcggtgatgtctctgactatggcgtgtcctcg
aatgaccatgtccatcttgatctggtccatgagggctcgacgattcactgcgtactcttc
ggatacaagcggtcagctatcgacgctacgatcgaggatgggatgcaggtggctgtgaaa
ggctcactgtcgtactacgaagacgggggcaacgtgtccgtcatcgtcgaagacatcgtt
gaggtcggtgaaggcacgtaccagcggatatacgagcaaaatcggcaactgctggactcg
gatgggttgcttgatccggagcacaaacaggcgcttccagacttcccagaacgaatcggg
atcgccaccagtgcaacaagcgatgcccgaatggatgcaattaccagcattcacgagcga
tatcctgacgttgatatcgtcatccagaacacgagtgttcagggcgacgatgcaatgatg
tcgatcatgggtgcgatcagtgaactcgacgacgacccgcgggtcgacgttatcgttctc
actcgcggcggcggttctgacaagcatctccgggtgttcaacgaaacaccgctctgccgt
gtcatccacaaaaccgagacgccagtcgtggttggagtcggccacgagaacgaccgaaca
ctggccgatgaagtggccgacaggcgggtgatgacaccgaccgaggtgggcaacatcgtt
ccagagcggaccacgctggacgcggaactggaaacactcgaagaacgtctcaacacagcc
tacacagagactgccgagacgacgctggaaacgatggatgaccgactcacacgggcctac
agacgaacagttgagtcggatctgtctgcgttcgaagctgagttggaccgcacatacgac
acccacgttcgagatgaactgactgatcttgcgaaccggctagagcaagcgcggacccag
tatgaccagcagcgaaaacgtgaacaagaggtcgctgcccatcgccgccagcgtcgacgg
ctgctgctcatcttggtagcgctgggcttgcttgttgtggccttgctcctgtacatcctg
cttccactatga
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