Haloarcula marismortui ATCC 33800: KDQ40_17585
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Entry
KDQ40_17585 CDS
T07272
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_17585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_17585
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_17585
Prokaryotic type
Archaeal type
TFB
KDQ40_17585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
XRCC4_C
DUF7575
Zn_ribbon_TiaS
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QUJ74262
UniProt:
M0JNN7
LinkDB
All DBs
Position
pHsi540:205376..206275
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AA seq
299 aa
AA seq
DB search
MSSQTVQTALSTATSGCPECGGELDSSGRETNCEDCGLVTDQDQIDRRPEWRTYDQEEQK
RTGAPRTATRHDRGLSTNIGSVDSADISPRRRRRLARQRRLHGRSKFTSKRDRNLAHGLG
EIRRIASALSESNAVKEQASTLFKKAQDKDLLIGRSIEGGAAAAVYAACRCNGLVTMETV
ADVARCSDSHIWNCYRTFLVELDLPIPVSLPVDWVARICSDLPFDVAPEIRQRALELAEQ
ATESTEINGRPDGIAAGALYLARKESDIRLTQATICEPLDVHITTARQWFQEIEEHIVS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacaaactgtccagacagcgttgtctacagctacgtcgggttgtcccgagtgt
ggcggcgaactcgacagcagtgggcgggaaacgaactgcgaggactgtggcctggtaacc
gaccaagaccagatcgaccgcaggccggaatggcggacgtacgatcaggaggaacagaaa
cggacgggcgcacctcggacggccactcgccacgaccgaggcctgtcgacgaatatcgga
agcgtcgatagtgcagacatctctccgagacggcgtcgacggcttgctcgccagcggcgg
ctccacggccggtcgaagttcaccagcaagcgcgaccggaacctcgctcacgggcttggc
gaaatccgacgcatcgcgagtgcgctatctgagagcaacgcggtgaaagagcaggcatca
acgctcttcaagaaagcccaagacaaggacctcctgatcggacggtcgattgagggcggt
gcagcggccgctgtgtacgccgcctgccggtgcaatggcctcgtgacgatggagacggta
gccgacgttgcccggtgttcagactcccatatatggaactgctaccggacgttcttggtg
gaactcgatctcccaatcccagtatcgctcccggtggactgggtggcgcggatttgttcg
gaccttccattcgacgttgccccggagattcgccagcgagcgctcgaactcgcagagcag
gcgaccgagtccaccgagatcaacgggcgaccagacggtatcgcagccggcgctctgtat
ctcgccaggaaagagtcagatatccggctcacacaagcgacgatctgcgagccactggat
gtgcatattaccacggcccgtcagtggttccaagagatcgaggagcatatcgtttcgtga
DBGET
integrated database retrieval system
