Haloarcula sinaiiensis: KDQ40_22735
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Entry
KDQ40_22735 CDS
T07272
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula sinaiiensis
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_22735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_22735
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_22735
Prokaryotic type
Archaeal type
TFB
KDQ40_22735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_TiaS
DUF7575
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QUJ74941
UniProt:
M0JPZ9
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All DBs
Position
pHsi139:100676..101575
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AA seq
299 aa
AA seq
DB search
MASQTVQTALSAATPGCPECGGALDSSGRETNCEDCGLVTEQDQIDRRPAWRTYDKEEQK
RTGAPRTATRHDQGLSTNIGSVDSADISPRQRRRLARQRRLHGRSKFTSKRDRNLAHGLG
EIRRIASALSESNAVKEQASTLFREAQDKDLLIGRSIEGGAAAAVYAACRCNGLVTMETV
ADVARCSDSHVWNCYRTFLTELDLPIPVSLPVDWVARICSDLPFDVSPDIRQRALELAEQ
ATESTAVNGRPDGVAAGALYLAGKESDIRLTQATICEPLDVHITTARQWFQDIEEHIVE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaaactgtccagacagcgttgtctgcagctacgccgggttgtcccgagtgt
ggcggcgcgctcgatagcagcgggcgagaaacgaactgcgaggactgtggcctcgtgacc
gagcaagaccagatcgaccgcaggccagcgtggcggacgtacgacaaggaggaacagaag
cggacgggtgcgccccgaacagccactcggcatgaccaaggcctgtcgacgaatatcgga
agcgtcgatagtgcagacatctctccgagacagcgtcgacggcttgctcgccagcgacga
ctccacggccggtcgaagttcaccagcaagcgcgaccggaacctcgctcacgggctcggt
gaaatccgacgcattgcgagtgcgctgtctgagagcaacgcggtgaaagagcaggcatcc
acgctcttccgggaggcccaagacaaagacctcctaatcggacggtcgattgagggcggt
gcagcggccgctgtgtacgccgcctgccgatgcaatggcctcgtgacgatggagacggta
gccgacgttgcccggtgttccgactcacatgtctggaactgctaccggacgttcctgaca
gaacttgacctcccgatcccagtatcgctcccggtggactgggtggcgcggatttgttcg
gaccttccattcgacgtttccccggatattcgccagcgagcgctcgaactcgcagagcag
gcgaccgagtccacagcggtcaacgggcgaccagacggtgtcgcagccggcgctctgtac
ctcgccgggaaagagtcagacatccggctcacgcaagcgacgatctgcgagccactggat
gtgcatattaccacggcccgtcagtggttccaggatatcgaggagcatatcgttgaatga
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