Haloarcula marismortui ATCC 33800: KDQ40_22735
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Entry
KDQ40_22735 CDS
T07272
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsin
Haloarcula marismortui ATCC 33800
Pathway
hsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KDQ40_22735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsin03021
]
KDQ40_22735
Transcription machinery [BR:
hsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KDQ40_22735
Prokaryotic type
Archaeal type
TFB
KDQ40_22735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_TiaS
DUF7575
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QUJ74941
UniProt:
M0JPZ9
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All DBs
Position
pHsi139:100676..101575
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AA seq
299 aa
AA seq
DB search
MASQTVQTALSAATPGCPECGGALDSSGRETNCEDCGLVTEQDQIDRRPAWRTYDKEEQK
RTGAPRTATRHDQGLSTNIGSVDSADISPRQRRRLARQRRLHGRSKFTSKRDRNLAHGLG
EIRRIASALSESNAVKEQASTLFREAQDKDLLIGRSIEGGAAAAVYAACRCNGLVTMETV
ADVARCSDSHVWNCYRTFLTELDLPIPVSLPVDWVARICSDLPFDVSPDIRQRALELAEQ
ATESTAVNGRPDGVAAGALYLAGKESDIRLTQATICEPLDVHITTARQWFQDIEEHIVE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaaactgtccagacagcgttgtctgcagctacgccgggttgtcccgagtgt
ggcggcgcgctcgatagcagcgggcgagaaacgaactgcgaggactgtggcctcgtgacc
gagcaagaccagatcgaccgcaggccagcgtggcggacgtacgacaaggaggaacagaag
cggacgggtgcgccccgaacagccactcggcatgaccaaggcctgtcgacgaatatcgga
agcgtcgatagtgcagacatctctccgagacagcgtcgacggcttgctcgccagcgacga
ctccacggccggtcgaagttcaccagcaagcgcgaccggaacctcgctcacgggctcggt
gaaatccgacgcattgcgagtgcgctgtctgagagcaacgcggtgaaagagcaggcatcc
acgctcttccgggaggcccaagacaaagacctcctaatcggacggtcgattgagggcggt
gcagcggccgctgtgtacgccgcctgccgatgcaatggcctcgtgacgatggagacggta
gccgacgttgcccggtgttccgactcacatgtctggaactgctaccggacgttcctgaca
gaacttgacctcccgatcccagtatcgctcccggtggactgggtggcgcggatttgttcg
gaccttccattcgacgtttccccggatattcgccagcgagcgctcgaactcgcagagcag
gcgaccgagtccacagcggtcaacgggcgaccagacggtgtcgcagccggcgctctgtac
ctcgccgggaaagagtcagacatccggctcacgcaagcgacgatctgcgagccactggat
gtgcatattaccacggcccgtcagtggttccaggatatcgaggagcatatcgttgaatga
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integrated database retrieval system
