Hydrocurvibacter sulfurireducens: WCY03_02490
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Entry
WCY03_02490 CDS
T11236
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsj Hydrocurvibacter sulfurireducens
Pathway
hsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY03_02490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsj03019
]
WCY03_02490 (recQ)
03400 DNA repair and recombination proteins [BR:
hsj03400
]
WCY03_02490 (recQ)
Enzymes [BR:
hsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY03_02490 (recQ)
Messenger RNA biogenesis [BR:
hsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WCY03_02490 (recQ)
DNA repair and recombination proteins [BR:
hsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCY03_02490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XAU11080
LinkDB
All DBs
Position
474698..476461
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AA seq
587 aa
AA seq
DB search
MLESYFGYGSFRPLQEKAIDAILQQKDLLMIMPTGGGKSLCYQLPSLMMDGVTIVVSPLL
ALMYDQVRALKTNGIKAEMISSMQNEEEIQNVRERLINAEIKLLYVAPERFASFEFVNFL
KSIKINFFVIDEAHCVSEWGHEFRADYRKLDLLRENFPTTSIAAFTATATSKVAEDIKHA
LMLHKPVEVHGKIFRENLHITVESRIKDGKKQLLEFLSSFKNESGIVYAFSRKQTEALAV
FLHTNGIKAKAFHAGLPTHVKEDTYKAFVHDEIQVVVATIAFGMGIDKSNIRFVVHMNLP
KTIENYYQEIGRAGRDGLKSEVFLLYSGSDVVMQREFIEQLEESPYKRNAFNKIEQMSRY
ATMEECRHHYIAAYFEDDIENCKDVCDNCIAPETKHSDITVDAQKLLSAIYRTNQTFGQA
YVIDVLRGSTLQKILDNGHDQLSVYGIGEEKSRAYWERVVERLMELSALKRGEFRALVLD
GAGMKILKNELKVFIKEERLSLKPKKEFVVHKDEDVDSEVFERLRILRAAIAKAEEKPAY
IIFGDKTLKEMAKALPKTKEEMLEVNGIGEVKYQRYGEQFLELCRTL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atattagagtcatattttggctacggttctttccgtccgcttcaagagaaggcgatagat
gcgatactgcagcaaaaagatctgttgatgattatgcctacgggcggtggaaaatcttta
tgctatcagcttccttcgcttatgatggatggtgttaccattgtcgtttctcctcttttg
gcacttatgtacgatcaggtgagagcattaaaaacaaacggcataaaagcagagatgatc
tcttctatgcaaaatgaagaggagatacaaaacgttcgagagcggctcataaatgcagag
ataaaactgctttacgtggcgcccgaacgttttgcatcttttgaatttgtaaactttttg
aaatctataaagataaatttctttgtcatagacgaagcgcactgcgtcagtgaatggggg
catgagtttcgtgccgattacagaaaactcgatcttttgcgtgagaattttcctacaact
tccatagcagcatttaccgcaacggctacttctaaagtggcagaagatatcaaacatgcg
cttatgcttcacaaacccgtcgaagtgcacggaaagatatttagagaaaatcttcatatc
accgtagaatcgcgcataaaagacgggaagaaacagctgctcgaatttttgtccagtttt
aaaaacgaaagcgggatcgtttatgcgttttcacgtaaacagacggaagccttggcggtc
tttttacatacgaacggcataaaggcaaaagcgtttcacgcagggcttccgacccatgtc
aaggaagatacctataaagcctttgtgcatgatgagatacaagtcgtcgtggcgaccatc
gcttttggcatggggatagataagagcaatatccgttttgtggtgcatatgaacctgcca
aagacgatagaaaactattatcaggagatcgggcgtgcaggtcgtgacggactaaaaagc
gaagtgttcttgctttacagcggaagcgatgtcgtgatgcagcgcgagttcatcgagcag
ctcgaagaatcgccgtataaacgaaatgcctttaacaaaatagagcagatgtcgaggtat
gcaacgatggaggagtgccgccaccactacatagcggcctattttgaagatgatatagag
aattgcaaagatgtctgcgacaactgcatcgcccccgagactaaacactcagacatcacg
gtagatgctcaaaaactgctctctgccatatacagaacaaaccagacattcggacaggcg
tacgtcatcgatgtccttcgcggcagtactttgcaaaagatactggataacgggcatgat
cagctttcggtttatgggatcggtgaagagaagtcgcgtgcctactgggaaagagtagtg
gaaagactgatggaactcagtgccctaaaaagaggcgaatttcgtgctttggtacttgat
ggtgccgggatgaagatactcaaaaacgagttgaaggtctttatcaaagaggagagactg
agtctcaagccgaaaaaagagtttgtcgttcataaagacgaagatgtagacagcgaagta
tttgagcggcttaggatactccgcgctgcgattgcaaaagccgaagaaaagcctgcgtat
atcatattcggtgacaagacactcaaagagatggccaaagcgcttcctaagacaaaagag
gagatgctggaggtaaacgggatcggagaggtgaagtaccaacgctacggagagcagttt
ttggagttatgccggactttatga
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