Hydrocurvibacter sulfurireducens: WCY03_07270
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Entry
WCY03_07270 CDS
T11236
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hsj Hydrocurvibacter sulfurireducens
Pathway
hsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY03_07270 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsj03019
]
WCY03_07270 (rny)
Messenger RNA biogenesis [BR:
hsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCY03_07270 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
TarH
KH_KhpA-B
KH_2
HDOD
dUTPase
PA26
DUF4945
Motif
Other DBs
NCBI-ProteinID:
XAU09171
LinkDB
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Position
complement(1440844..1442412)
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AA seq
522 aa
AA seq
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MLTIVLLGALIAIVSGVAGFFISKKVSSANFEIYVEQARSKAKAIESEAELLLHKANLKS
QEIELEAKKEYESVKDRVKRDMQERDDELQRKEREFGKYKESETQKLKNENLALSSERLK
LKRNEKSLEIIKHDYESRIDDVIKVLEGASGMTKKEAKTLLLQKVEESSRADISHIVRKY
ENEAKTEGQRKANFILAQATTRYAGDFASERLVNNIYLESDELKGRIIGREGRNIKALEM
VLGVDIIIDDTPNTIVVSSFNLYRRAIATRTIELLVEDGRIQPARIEDIYQKVCDEFEDK
ILQEGEDVVAKMGLPPMHPELMKLIGRLRYRASYGQNALAHTLEVAHLAGIMAAEMGGDP
LLAKRAGLLHDIGKSLTHDVDGNHVDLGVEVCTRYNESEVVINAIYAHHGHEEIKSVECG
AVCAADALSAARPGARREVLESFLKRVSLVEEIASKHNGVKQSYAINAGRELRVIVNATL
INDDESVLLAKEIAKEIEEKVQYPGEIKVNVIRETRATVYAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctgactatcgtactgttaggggctttaatagccatcgtaagcggggtagcaggtttt
ttcatttctaaaaaagtttcaagtgccaattttgagatatatgtagaacaggcaagatca
aaagccaaagccatcgagagcgaggccgaactacttttacataaagcgaatttaaaatct
caagagatcgagttggaggccaaaaaagagtacgaaagcgtcaaagaccgcgtgaaacgc
gatatgcaggagcgtgatgacgaacttcaaagaaaagagcgtgagttcggcaaatataaa
gagagcgaaacgcagaagttaaaaaatgaaaatttggcattatccagtgaaagattgaaa
ttaaaaagaaatgagaaatctctagaaataataaaacatgattatgaatcgcgtatcgac
gatgtcataaaagttttagagggtgcctcgggaatgacaaaaaaagaggctaaaacgttg
cttcttcaaaaagttgaagagagctcgcgtgcggatatttcacatattgtccgcaaatat
gaaaacgaagcaaaaacggaagggcagagaaaagccaacttcattctggcgcaggccacg
acccgctatgcaggagattttgcaagcgaaaggctcgtgaacaatatctaccttgaaagc
gacgaactaaaagggcgcatcataggcagagagggcagaaacattaaagcgctggagatg
gttctgggcgtcgatatcatcattgacgatacgccaaataccattgttgtgagcagtttt
aatctttacagacgcgccatcgccacacggacgatagaacttcttgtggaggatggccgc
atccagcccgcacgcatagaggatatctaccaaaaagtgtgtgacgagttcgaagacaag
atactgcaagagggtgaagatgttgttgcgaagatgggtcttcctcctatgcaccccgag
ctgatgaagcttataggaagactcaggtaccgtgccagctacggacaaaatgcacttgcg
catacgcttgaagtggcgcacttggcgggcatcatggctgcagagatgggtggtgacccg
ctgttggcaaaaagggcgggtctgcttcatgatatcggcaaatctctgacgcatgatgtc
gacggcaatcacgtcgacctcggagtagaggtgtgcacgagatacaacgagagcgaagtg
gtgataaacgccatctatgctcaccacgggcatgaagagatcaaaagtgtggagtgcggc
gctgtctgtgctgcggacgcgctctcagctgcccgtccgggcgcaagacgcgaagtactc
gaaagttttttgaagcgggtaagtctggtcgaagagatagcttcaaaacataacggcgtc
aaacagagctatgccataaatgcgggtcgtgaactaagagtcatcgtgaatgcgacactg
ataaacgatgatgaatccgtgcttctggcaaaagagatagcaaaagagatagaggaaaag
gtccagtatcccggagagataaaagtaaacgtgatacgcgagacaagagctaccgtttac
gcaaagtaa
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