Hydrocurvibacter sulfurireducens: WCY03_09575
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Entry
WCY03_09575 CDS
T11236
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hsj Hydrocurvibacter sulfurireducens
Pathway
hsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCY03_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsj03400
]
WCY03_09575
Enzymes [BR:
hsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY03_09575
DNA repair and recombination proteins [BR:
hsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
WCY03_09575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAU09604
LinkDB
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Position
complement(1883571..1886561)
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AA seq
996 aa
AA seq
DB search
MSQTRLFEYIKTTKKPSLDLLICQDDKEASSLADVAGFFDLDYVVFPDFRARFKDDLRPF
KEELFELFRALRKYYNSDKKPLVISPVKTLLFPFPKEELLRSTVIEFGSTIDLPGFKEQM
FFWGYEFVDIVQMEGEISFRGDIIDIYSPSAKNPVRVSLFDNEIEQIKEFELETQRTVGE
ELENFEITSAFYSLEEGEFNSLKERIVQSDSDSFVKDLASLGFWYLDELSQNFLEGKNVK
LIHGLEPVLDEAYGLNDPQIPRESFNADIVAPEDIYHPVILTDVKSLLNVHKNKKITLIA
SNESQIKQSGIFDLEGIEVRYAPIILNVIGENELIVSLNKPEKKRRRRKTSILLDDLKPG
DYVVHEDYGVGIFEKIDQMEILGGIKDFIVIRYMGDDKVLLPVENLDYIDRYIAGGGAVP
VLDRLGKGSFAKLKESVRSKLFEIASSIVNTAAARALIKAPKIEVSKGIIQDFQASAGFL
YTDDQKQSIDEILDEISSGHIMDRLLSGDVGFGKTEVAMNAIYAACKAGFQSALIVPTTL
LSSQHFKSLDRRFDELGVRVAKLDRFIGAKEKKNILSALKEGAIDVVVGTHAVFGAVFHK
LGLVIVDEEHKFGVKQKEKIKELYNNIHMLSMSATPIPRSLNQALSSIKTMSTLQTPPME
RQGVRTFVKSYDEKLIKEVILRELRRGGQVFYVHNSIDHMPIKYGELRALLPELRMVMLH
SKISSADTEKELLKFENREYDLMIATSIIESGIHMPSVNTMIIDGADRFGIADLHQLRGR
VGRSNIEGFAYFIVEDKENITEEAKKRLIALESNSFLGSGSVLAYHDLEIRGGGNLVGDA
QSGHIKNIGYSLYLRMLEDAIKELSNKVEEKKAKVDIKLAISAYISDAVVSEDRLRLDLY
RRLSQAEDVNEIYEIEEETVDRFGALDDVTKQFFELMVIKLLSLSKKIKTVTSYAQNITF
IYQNDSKESISAPSKDDDDIIKATLGYLRNSKPKVF
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaaacacgtttatttgagtatataaaaactacaaagaaaccctctttggacctc
ttgatatgtcaagatgacaaagaggcttcttctctcgccgacgtagccggattcttcgat
ctggattatgtcgttttccccgattttcgagcaagattcaaagatgatctccgccctttt
aaagaggaacttttcgaacttttcagagctcttagaaaatactataacagcgacaaaaaa
ccgctggtgatctcacctgttaaaaccctgctttttcctttcccgaaagaggagcttttg
cgctcgactgttatagagttcggttcaacgatagatctgcccggctttaaagaacagatg
tttttttggggctatgagttcgtcgatatcgttcagatggagggagagatctcttttcgt
ggagacatcatcgatatctactctccctcggcaaaaaatccggtaagagtttcacttttt
gacaacgagatcgagcagataaaggagtttgaacttgagactcagagaaccgtaggcgaa
gagctggagaattttgagataacttctgccttttattcacttgaggaaggggagttcaac
tctttaaaagagaggatcgtacaaagcgacagcgacagctttgtgaaagatctggcatcg
cttggtttttggtatctcgatgagctttctcaaaactttttagagggcaaaaacgtaaaa
ctgatacacggtttggagccggttttagacgaggcgtacggattaaacgatccgcagata
ccaagagagtctttcaacgcagatattgttgctcccgaagatatttatcaccctgtcatt
ctcaccgacgtcaagagtcttttaaacgttcataaaaacaaaaaaatcacgcttatcgct
tcaaatgagtcacagataaaacagtcgggtatctttgaccttgaagggatagaagtccgt
tacgctccgataatactaaacgtaataggagaaaacgagcttatcgtttcgctcaataaa
cccgaaaagaaacgcagacgaagaaagacatctatccttttagatgatctaaaaccgggc
gattatgtagttcatgaagattacggcgtgggtatctttgagaagatcgaccagatggag
atactcggcggcataaaagatttcatcgttatccgctatatgggtgacgataaggttctt
ttgccggtagagaacctggattatatagacagatatatcgccggaggcggagccgttccg
gtcttggacaggctcggaaaaggcagttttgcaaaactcaaagagagtgtcagaagcaaa
ctcttcgagatagcttcatcgatcgtgaacaccgctgctgcgcgcgcgctcataaaagcg
ccgaagatcgaagtctccaaaggtatcatacaggattttcaagcttcggcgggattcctt
tacaccgatgaccaaaagcagtctatagacgagatccttgatgagatatcaagcgggcat
atcatggacaggcttttaagcggggatgtcggttttggaaagacggaggtggctatgaat
gcaatctacgccgcttgtaaagcgggatttcaaagcgcgttgatcgttcccactacgtta
ttgagctcacagcattttaaatcgcttgacagaagatttgacgaattgggtgtcagagta
gcaaagcttgacaggtttatcggtgcaaaagagaagaaaaacatattaagtgctttaaaa
gagggtgccatcgatgtcgtggtgggtacgcatgccgtctttggcgccgtgtttcacaaa
ctcgggcttgttatcgtggatgaagaacacaagttcggagtaaaacaaaaagagaagatc
aaagagctttataataatatccatatgctttccatgagtgccacgcctatccctaggtcg
cttaaccaggcgcttagctccataaagaccatgagcacgcttcagaccccgccgatggag
agacagggggtgaggacctttgtcaaaagctatgacgaaaaactcataaaagaggtgatc
cttcgcgagcttcgccgcggcggacaggttttttacgtccataactccatagaccacatg
ccgataaaatacggcgagttaagagcgcttctgcccgaactcagaatggtcatgcttcac
tccaagatttcttcggcagatacggaaaaagagcttttaaagtttgaaaaccgtgagtat
gacctgatgatcgcgacctccatcatcgagtcgggtattcatatgccttcggtaaatacg
atgataatagacggagccgaccgattcggtatcgcggatcttcatcagctgcgcggacgc
gtagggcgttcgaatatcgaaggcttcgcctattttatagtcgaagataaagagaatatt
acagaagaagcaaaaaaacgccttatcgctttggaatcaaactcgtttttgggaagcggt
tcggttcttgcctatcatgaccttgaaataagaggcggaggaaatctggtaggcgatgca
caaagcggccatattaaaaacatcggttactctctttatctgcggatgctcgaagatgcg
ataaaagagcttagtaacaaggttgaagagaaaaaagcaaaggtcgatataaagcttgct
atcagcgcatatatatcagatgctgttgtaagtgaagacagactcagactcgatctgtac
cgccgcctctcacaggctgaagatgtaaacgagatatatgagatagaagaggagacggtc
gatagattcggtgcacttgatgatgtgacaaaacagttcttcgagcttatggtcatcaag
cttttgagtctgagcaaaaagataaaaacagtcacctcatatgctcaaaacattacgttt
atctatcaaaatgattctaaagagagcatcagtgcaccgagcaaagacgatgacgatatc
atcaaagcaacactggggtatctaagaaactccaaacccaaagttttttaa
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