Hydrocurvibacter sulfurireducens: WCY03_10035
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Entry
WCY03_10035 CDS
T11236
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsj Hydrocurvibacter sulfurireducens
Pathway
hsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY03_10035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsj03019
]
WCY03_10035
03016 Transfer RNA biogenesis [BR:
hsj03016
]
WCY03_10035
Enzymes [BR:
hsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WCY03_10035
Messenger RNA biogenesis [BR:
hsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WCY03_10035
Transfer RNA biogenesis [BR:
hsj03016
]
Prokaryotic type
tRNA degradation factors
WCY03_10035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
YdaT_toxin
S1_2
KH_PARP14_8
TAF10
Motif
Other DBs
NCBI-ProteinID:
XAU09693
LinkDB
All DBs
Position
complement(1970845..1973019)
Genome browser
AA seq
724 aa
AA seq
DB search
MKYDVNLALANKEENYSFNDVARQANGAAWLRCKNTVMLATVVIDETEVVEDDFLPLTVQ
YIEKTYAAGKIPGGFFKRETKPSDFETLTSRIVDRSLRPIFPKGFGYPTQISIMVLSVDE
DADLQVLALNAASAALYVSDIDISTSVSAVRVAKIEGELKFNPTIKELNDSTFDLYLSGT
KDDMLMIEMRSLGSTEVEMIDAPMVDPMLDPALIAQTMQRHSSNAMPEDELIDILAKAQT
ILKESNTLYEQEFAPYCKAVKPLELKAHFINEEMVAYVAQKHISDIKAALVQMAKSERST
ALRTLRKEILKEQPQWCELDLKNAIETVKRDVVRKMILQDNIRADGRAVDQVRPITIDTN
VLPSAHSSCLFTRGQTQALVALTLGGPKDAQMYENLTDSGTQNENFMVHYNFPGFSVGEA
SPIGAPRRRELGHGNLAKRALEPILDMEGETIRLVSEILESNGSSSMATVCGGYMALRAA
DIETSDVIAGIAMGMVSEGDKHVILSDIMGLEDHDGDMDFKVTGSKEGITAMQMDIKLGG
ISLDILKKALYQAKEGRIHILDIMNEAIGNIEFNDGVLPTTSIFHVDPGIIGEIIGQAGK
TIREIIEKFEVAIDIDKKVGKVKLSGTNKDSLSAAQEHIENIASSAKVNKVEYKVGDIVD
GKVKKIVDFGAFIELPGGVDGLLHISKISEGRVEKVSDVLSEGDAIKVEILEFKGNKIGL
GRAH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatacgatgttaatttagcactggcaaacaaagaggaaaattattccttcaatgat
gtagcacgtcaggcaaacggtgcggcgtggctgagatgcaaaaataccgttatgctcgct
accgtagttatagacgagacagaagtggtagaggatgattttttacctttgacggttcag
tatatagaaaaaacatacgcggcagggaagatccccggcggattttttaaacgcgaaaca
aaaccgagcgattttgaaacattgacatcacgcatcgtagatagatctcttagaccgatc
tttccaaaaggtttcggttatccgactcagatctccattatggtcttaagtgtcgatgag
gatgccgatcttcaagtcctggcactaaacgctgcttctgccgctttatatgtttcagat
atcgatatatcgactagtgtgagcgccgtgcgcgttgccaagatcgagggagagttgaaa
ttcaatccgacgatcaaggagctgaacgattcgacattcgatctgtatctttcgggtact
aaagacgacatgctgatgatagagatgaggtctctcgggtcaacggaagtagagatgata
gacgctcctatggtcgatcctatgctggatcccgctttgatagcccaaaccatgcaaaga
cactcctcaaatgcgatgccagaagatgaactcatagatatccttgccaaggctcaaaca
atattaaaagaatcaaatactctttatgagcaggagtttgctccatactgcaaagcagta
aagcctttagagttaaaagcacatttcatcaatgaagagatggtcgcttatgtggcacaa
aaacatatctccgatataaaagcggcgcttgtacagatggctaagagcgaacgttcaacg
gctttgagaacattgagaaaagagatattaaaagaacagccccaatggtgcgagcttgat
cttaaaaatgccatagagaccgtaaaacgcgatgtagtaagaaagatgattttgcaggat
aatatacgtgctgatggcagagcggttgatcaggttcgtcctattacgatagatacgaac
gtgcttccttctgcacactcgtcatgtctgttcacccgcggtcagacccaggcccttgtc
gctcttacattgggcggaccaaaagacgctcagatgtacgaaaatcttacggattccggt
actcaaaacgaaaactttatggtgcattataattttcccggcttttctgtcggtgaagct
tcgcctatcggtgctccaagacgcagggaactcggacatggaaatcttgcaaaacgcgca
ctagaacctatcttggatatggagggagagacgatacgtttggtttccgagatccttgaa
tcaaacggctcttcatcgatggcaacggtctgcggcggttatatggcgcttcgtgcggca
gatatagagacatcggacgttatcgcgggaatcgctatgggaatggtcagcgaaggtgac
aagcatgtaatactgagcgatatcatgggtcttgaagaccatgacggggatatggacttt
aaagtgacgggttccaaagagggtatcactgcgatgcagatggatataaaactcggcgga
atcagtctggatatactcaaaaaagctctttatcaggcaaaagaggggcgtattcatatt
ttagatattatgaacgaagctatcggcaacatcgagtttaacgacggagtcctgccgact
acgagcatctttcatgtcgatcctggaatcataggcgagatcataggacaagcgggcaaa
acgatacgcgagatcatcgaaaaattcgaagtagcgatcgacatagataaaaaagtgggt
aaggtgaaactttcgggaacgaacaaagactcactttctgcagcacaagaacatattgaa
aatattgcatcatcggcaaaagtaaacaaagtagagtataaggtcggtgatatagtcgat
ggaaaagtcaaaaaaatagttgatttcggagcatttatcgaacttccaggcggagtggac
ggtcttttgcacatctccaagatctctgagggcagagtagagaaagtttcagacgtactc
agcgagggagatgccataaaggtcgagatattagagtttaaaggaaataagatcggtttg
ggacgtgcacattaa
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