Hymenobacter sediminicola: H4317_00075
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Entry
H4317_00075 CDS
T09117
Name
(GenBank) pseudouridine synthase
Organism
hsk
Hymenobacter sediminicola
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QNH62267
UniProt:
A0A7G7W7C4
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Position
complement(14289..16121)
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AA seq
610 aa
AA seq
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MGKKHNSGNPAGRSGRTDRPSSSTGGSGFYQKFNAPRGGSDRPSSGGDRERPNRSGDAGN
RNSSSDRPAFGRGPGDRTGGFGGPKKFGGPNKSGGSFGRSNDSGFGGGFRGRDNDSGGRP
YGNRPAEGGRGFERGGPRRDDDRRGSSFGGPRREDDRPVRPFAPKKTWEGQPYRQEGRPA
VPRGGAGERNRKFIKSDPNQPETPRDFKPRDTSFDATPRTDGNLGPDREIRPARPFDFRG
RPEGFDEQPAPRRERDAESGDRTRGTYGERREGGFGTRSTGERSSFGTRSLNDRPDRKEG
GFGASRSFGERDARPARPERPAPTRFGRDASTPNRADKLKRGEVAGQAPDYKNLKHYEDD
KNRGNKRRRQEDESGDELRLNRYIANAGVCSRREADSLIAAGEIKVNGEVVTEMGYKVLP
TDTVQYGKTNLNREKLVYVLLNKPKDTITTTEDPEGRRTVMDLIKESSKERIFPVGRLDR
NTTGLLLFTNDGEVAQKLSHPSHRNKKIYQVELDKPLTEEHLKQIAAGVELEDGKAEVDD
VAVVAGNAHFVGVEIHIGRNRIVRRIFEHLGYDVVTLDRVQYAGLTKKDLPRGKWRFLNE
KEVIRLKYFM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaagcacaactccggcaatccggccggccgtagcggccgcaccgaccgaccc
tccagcagcactggcggatcgggtttctaccaaaaatttaacgcgccacgtggcggtagc
gaccggcccagctcgggcggcgaccgtgagcggccaaaccgctccggcgacgcaggcaac
cgaaacagttcttctgaccggcctgctttcggccgtggccctggcgaccgtaccggtggc
tttggtggcccgaagaaatttggcggacccaacaagtcaggtggcagctttggccgtagc
aacgacagtggctttggtggtggcttccgtggccgcgacaacgatagtggtggccgtcct
tacggcaaccggccggcggaaggcggccgtggctttgagcgtggcggcccgcgccgcgac
gatgaccgtcggggcagcagcttcggagggccacgccgcgaggacgaccgtccggtgcgc
ccgtttgcacccaaaaagacgtgggaaggccagccctatcgccaggaaggccgcccggca
gtgcctcggggtggtgccggcgaacggaatcggaagttcatcaaatcggaccccaaccag
ccagaaacgccgcgcgacttcaagccgcgtgatacgtctttcgatgcaactccacgaact
gatggcaacctgggacccgaccgggaaatccggcctgcccgccccttcgattttcggggc
cgtccggaaggatttgatgagcagccagccccccgtcgtgagcgggatgccgaatcaggc
gacagaactcgtggcacctacggcgagcggcgtgaaggaggcttcggcacccggagcacc
ggcgagcggagcagctttggtacgcgtagcctgaatgaccgacccgaccggaaagaaggc
ggttttggtgccagccgcagcttcggcgagcgggacgcccgtccggcccgacccgagcgc
ccagcgccgacccgctttggccgcgacgcctccacacccaaccgtgccgacaagctgaag
cgcggtgaagtagctggccaagctcccgactacaagaacctcaagcactacgaagacgac
aagaaccgcggcaataagcgtcgtcggcaggaggatgagagtggcgacgagctgcgtctg
aaccgctacatcgccaacgcgggtgtttgctcccgccgcgaggccgactcgctgattgca
gcgggcgaaatcaaggtgaatggcgaagttgtgacggaaatgggctacaaagtgctgcct
accgacacggtgcagtatggcaagaccaatctcaaccgggagaagctggtgtacgtgttg
ctaaacaagcccaaagacaccatcacgacgaccgaagacccggagggccgccgcacggta
atggacctcattaaggaatcgtcaaaggagcgtattttcccggtcggccgcctcgaccgt
aacacaacgggcctgctgctcttcaccaacgacggggaggtggcacagaaactttcgcat
ccttcgcaccgcaacaaaaaaatctaccaagtagagctggacaagccactcacagaagag
cacctgaagcagattgcggccggtgtagagctggaagatggcaaggctgaagtggacgac
gtagctgtggtagcaggcaacgcgcactttgtgggcgttgagattcacattgggcggaac
cgtattgtgcgccgcattttcgagcatctaggctacgatgtagtgacgcttgaccgggtg
cagtacgcgggcctcacgaaaaaagacctgccacgcggcaaatggcgcttcctgaacgag
aaggaagttatccggctgaagtatttcatgtaa
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