Hymenobacter sediminicola: H4317_01545
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Entry
H4317_01545 CDS
T09117
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hsk
Hymenobacter sediminicola
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsk03009
]
H4317_01545 (rimO)
Enzymes [BR:
hsk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H4317_01545 (rimO)
Ribosome biogenesis [BR:
hsk03009
]
Prokaryotic type
ribosomal protein modification factors
H4317_01545 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNH62540
UniProt:
A0A7G7W847
LinkDB
All DBs
Position
363025..364338
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AA seq
437 aa
AA seq
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MKVRSQQANKVNVITLGCSKNIVDSEVLMGQLRANQFEVTHEAEQSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGKLDKLYVTGCLSQRYKDDLEVEIPQVDAFFGTLELPQLMK
TLEANYMHELVGERLLTTPKHYAYFKIAEGCNRPCSFCAIPLMRGKHMDRPIEDLVKEAN
RLASMGTKELILIAQDLTYYGLQHYGERKLADLLRNLSDVNGIDWIRLQYAYPSQFPMDA
LDVMNERDNICKYLDMPLQHISDNMLKTMRRGISKRRTVELVDTIRQRVPDIALRTTLIA
GHPGETQQDFEELYRFVEETRFDRLGIFNYSHEDNTHSYTLEDDVPAEVKQDRADQIMEL
QQGISMELNEERVGQTHKVLFDRKESGYFVGRTQYDSPEVDNEVLVPATKDTYVRLGDFA
QVQITEASDFDLYGKLV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagaagccagcaggccaataaagtcaacgtcatcaccctcggctgctccaag
aacatcgtggactcggaggtgcttatgggccagcttcgcgccaaccagtttgaggtgacg
cacgaagccgaacagagcgacgccaacatcgtcatcatcaacacctgcggctttatcgac
aatgccaagcaggaaagcattgataccatcctgcgctacgccgacgagaaggaagccggc
aaactggacaagctttacgtgacgggctgcctctcccagcgctataaggacgacctggag
gtggaaattccgcaggtagatgctttcttcggcaccttggagctgccgcagctgatgaag
acgctggaggccaactacatgcacgagctggtgggcgagcggctgctgaccacgcccaag
cactacgcctacttcaagattgccgagggctgcaaccggccctgctcgttctgcgccatc
ccgttgatgcgcggtaagcacatggaccgccccatcgaggacttggtgaaggaagccaac
cgcctcgcctccatgggaaccaaggagttgattcttattgcccaggatctgacctattac
ggcctgcagcactatggcgagcggaagctggccgacctgctccgcaacctgtccgacgtg
aacggcatcgactggatccggctgcagtatgcctacccctcgcaattcccgatggatgcc
ctggacgtgatgaacgagcgggacaacatctgcaaatacctggatatgccgctgcagcat
atttccgataacatgctgaaaaccatgcgccgcggcattagcaagcgtcgcaccgtggag
ctggtggataccatccggcagcgggtgcccgacattgcgctccgtaccacactcattgcg
ggccaccccggcgagacccagcaggatttcgaggaactgtaccgcttcgtagaggaaact
cgcttcgaccggttgggcatcttcaactattcgcacgaagacaatacgcactcctacacg
ctcgaagacgacgtgccggccgaggtgaagcaggaccgcgccgaccaaattatggagctg
cagcagggtatttcgatggagctgaacgaggagcgcgtgggccagacccataaggtgctg
ttcgaccgcaaggaaagcggctactttgtgggccgcactcagtacgactcgccggaagta
gacaacgaagtgctggtgcctgccaccaaagacacctacgtgcgtctcggcgacttcgca
caggtgcagattacggaggcctcggacttcgatttgtacggcaagctggtataa
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