Hymenobacter sediminicola: H4317_02145
Help
Entry
H4317_02145 CDS
T09117
Name
(GenBank) PAS domain S-box protein
Organism
hsk
Hymenobacter sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
HATPase_c
Response_reg
PAS_9
PAS
PAS_8
HisKA
PAS_7
PAS_12
Hpt
DUF569
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNH62649
UniProt:
A0A7G7W8F6
LinkDB
All DBs
Position
complement(484974..488525)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSSISQRQLQRRLRHAEQAQQALRQELQQLREQSHLQSQAAAGQLTALLQTISTGLLAQD
EHCHIKLINQRLCDLLALPDPPAAYIGQDCHQVLRQSAAFRRPDDVLQQADEAMRAQLRR
AELVELANGRVLQREYLPVVQNGRTMLHLWSYEDVTRQRQVQAHVQELSQLAEQSPDPII
CFGHDGQARYANPAAGPVLRALARPEWQPDREFLHQQVKSALQENTSRIVERQLDGAFYH
WTIVPLLQEEAANIYLTDITARRQAETQLRHSQLLMARINDTIPAVVFLYDLQAHRLNYI
NRQIERVLGYPEQTIETQAGLLQQIIHPEDLRSLFNKRGYLQALPDGELSTGEYRVRHQN
GNWRWLWIRSTAFTRDENGLVYQVLCSAEDITQRKATEEALRQSQLLVERVAYTAPNLIY
IYDLAEKRNVYSNRHIEVMLGYTEEEIQEMGGEVLERLMPPTEVQRLREHYEHVAQLADS
EILSLEFHLTHRNGSARWLRVTDTPFERDAAGQVRQIVGVGEDITRWKVADEQRRTANRR
LAEQNRLFRQVIDTTPHLIYLKDNLGNYLLANRATAELYGMTPEQIVGAQPDQLPAMLTD
GQRYRQQDEQVLRTGQELIQEETFTKPDGEILWFYSIKRPFVLADGNMQVLGVDINITEL
KRTQLDLHAAKEAAEENAQAKQNFLANMSHEIRTPLNGILGMAGLLSKTPLDDQQSQFLG
HIRHSADHLLVVINDVLAMAQLGAGKIRPENIPFDLREVLRASQESLLPRAQEKGIALEL
ELPPATVPTTVLGDPHRLRQVLLNLLSNAVKFTEHGQVLLTCRRLSQPGEEPLFQFQVLD
TGPGIPPDQLQEMFEPFTQASASTAREYGGSGLGLSISRGLVDLMGGTMMAESRLHEGST
FGFTLTFRPAEPTAVKVPAKAATNYRELGARRVLLAEDNAVNQFLVESLLRGWGWTVDTA
STGPDALALFDQHSYDIVLMDIQMPGMDGVAATRRLRQHPEAQRAATPVLALTAHALRGE
AERYAEAGFSGYLSKPFREEDLFRTIAAALGKRPAVESAEFISGAETANAPLYSLSGIRR
LAHGNEEFVRRLAHLFIQTTPPAVRELEQHAASGQCEQLAAAAHHLKSSLDGLHIRQLHA
PIRRLEACRDTPLEPQEAQQLVTLVREVTEQVMAGLRRDFPGL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatcagtcaacgccagctacagcgccgcctccggcacgcggagcaagcccaa
caagcgttgcggcaggaactgcagcaactgcgtgaacagtcgcacctacagagccaggct
gccgctgggcagcttaccgcgctgctccagacaatcagcaccggcctactagcgcaggac
gaacattgccacatcaagctcatcaatcagcggctctgcgacttgctggcgctacccgat
cctcccgcagcctacattggccaggactgccatcaggttctgcgccagtcggcagctttc
cgacggcccgacgacgtgctgcagcaggcggatgaggcgatgcgggctcagctgcgccgg
gccgagctggtagagctggccaacggtcgtgttctgcagcgcgagtacctgccggtggta
cagaacgggcgcacgatgctacacctttggagctacgaagacgtaactcgccagcggcag
gtgcaggcccacgtgcaggaactcagccagctggcagagcagagcccggaccctattatc
tgtttcgggcacgacggccaggcccgctacgccaatccggcagctggcccagtactccgg
gccctggctaggccagagtggcaacccgaccgggagtttctgcaccagcaagtaaaatcg
gctctgcaggagaatacctcccgcattgtggagcgtcagctcgatggggcgttttaccac
tggaccattgtaccgctgctccaagaggaagcagctaacatttacctcaccgatattacg
gcccgccgccaggccgaaacccagctgcgccacagccaattgctcatggcccgcatcaac
gacaccattccggcggttgtttttctctacgatctgcaggcacaccgcctcaactacatc
aaccggcagatagagcgggtactaggctaccccgagcagaccattgaaacccaggcgggg
ctgttgcagcagattattcatccggaggatctgcggagtctgttcaacaaacggggctac
ctgcaggcgttgccagatggggaacttagcaccggcgagtaccgggtacggcaccagaac
ggcaactggcggtggctctggattcggagcacggctttcacgcgcgacgaaaacggcctc
gtgtaccaagtgctgtgcagcgccgaggatattactcagcgtaaagccaccgaagaagcc
ctgcgccaaagccagttgctggtggaacgcgtcgcctacacagcccccaaccttatctac
atctacgacctggctgaaaagcgcaatgtgtactccaaccggcacatcgaagtcatgctg
ggatatacggaggaggaaatccaggaaatgggcggggaagtgctggagcggctgatgccc
ccgacggaagtacagcggttgcgggaacattatgagcacgtagcccaactagcggacagt
gaaatcctgtccctggaatttcatctcacccaccgcaatggatcagcccgctggctgcgc
gttacggacactccttttgagcgggatgcggccgggcaagtgcgccagatagtaggcgtt
ggagaagacattacgcgctggaaagtagccgatgagcagcgccgcactgccaaccggcgg
ctggccgagcaaaaccgtcttttccgccaagttatcgacactacgccgcacctcatctac
ctcaaagacaacctaggcaactatttgctggccaaccgcgccaccgccgagctatacggc
atgaccccggagcagattgtaggcgctcagcccgaccagctgccggccatgctgaccgat
ggacagcgctaccgccagcaagacgaacaagtgctgcgcaccgggcaggagctcatccag
gaagaaacgtttaccaagcccgacggcgagattctctggttttacagcatcaaacgcccg
tttgtgctggccgatggcaatatgcaggtgctgggtgttgatatcaacatcacggagctg
aaacgcacgcagcttgatttgcacgctgccaaggaagcagccgaagaaaacgcacaggcc
aagcagaacttcctggccaacatgagtcacgaaatccgcacaccgctcaacgggattctg
ggcatggccgggctgctatccaagacgccgctcgacgaccagcagagccagttcctgggc
cacatccgccactccgccgaccatctactagtcgtcatcaatgatgtgctggcaatggcg
cagctgggagccggcaaaatccggccggaaaatattccttttgatttgcgggaagtactg
cgggccagtcaggagtcgttgctgccacgggcacaggagaaaggtattgcgcttgagctg
gagctgccgccggccaccgtgcccactaccgtgctcggcgacccgcatcggctgcgtcag
gtgttgcttaatctgctcagcaatgccgtaaagtttaccgagcacgggcaggtgctcctc
acgtgccgccgcctcagccagcccggcgaagagcccctgtttcagttccaggtgctggat
accgggcccggtattccacccgatcagctgcaagaaatgtttgagcccttcacgcaggct
tcggccagcacggcccgcgaatatggcggctccggcctgggcctgagcatttcgcgcggc
ttggtagacctgatgggaggcaccatgatggccgaaagccgcctgcacgaaggcagcacc
ttcggctttacgctcaccttccgccccgctgagcctaccgccgtgaaagtgccggccaaa
gcagccaccaactaccgggagctgggggcccgccgggtgctgctggccgaagacaatgcc
gtaaaccagtttctggtagaatcattgctgcggggctggggctggacggtagataccgcc
agcaccggcccggatgcgctggcactgtttgaccaacacagctacgatattgtcttgatg
gatattcagatgcccggtatggatggagtggccgctactaggcgcctgcgtcaacatccg
gaggcgcagagagccgctacgccggtgctggctctcacggcccacgccctgcgcggcgag
gcggagcgctacgcggaagcgggcttctcagggtatctatccaagccatttcgggaagaa
gaccttttccggactattgctgccgcgttgggtaagcggccggcggtagaatcagcggag
tttatttccggtgcagaaacggctaacgctccactttacagcctgagtggtattcggcgg
ctggcacacggcaacgaggaatttgtgcggcgcctcgcgcatctgtttatccagactact
ccgccggccgttcgtgagctggagcaacatgccgcatccgggcagtgcgagcagctagcc
gctgccgctcatcacctcaaaagctccctcgatggactgcacatccggcagttgcacgcg
cccatccgccgcctggaagcctgccgcgacacgcctctggaaccacaggaagcgcaacag
ctggtaaccctggttcgtgaggtgaccgagcaggtgatggccggactgcggcgggatttt
ccgggactgtag
DBGET
integrated database retrieval system
