Hymenobacter sediminicola: H4317_03605
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Entry
H4317_03605 CDS
T09117
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H4317_03605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsk03021
]
H4317_03605
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_03605
Enzymes [BR:
hsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H4317_03605
Transcription machinery [BR:
hsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H4317_03605
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H4317_03605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QNH62910
UniProt:
A0A7G7W967
LinkDB
All DBs
Position
832014..833003
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFYGTFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVRTS
SVLHEFMTIEGVIEDMSEIILNLKQVRFKKVSDAIEDKITVRIKGQETFTAGDISKFTNG
FQVLNPDLVICHVDANTELEFEFTIQKGRGYVPAEENKPADQVFGQIAIDAIFTPIKNVK
YSIENTRVEQKTDYEKLLIEIHTDGSIHPEDALKGAANILIQHFMLFSDSTMTFETAKAE
EEETVDEETLHMRKVLKTPLADMDLSVRAYNCLKAADIKTLGDLVQLDMADMMKFRNFGK
KSLTELENLVEEKGLNFGMDLSKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttagcttttcaaatgccggagaaggtggtaatggagaaatccgacgacttc
tacggaacgtttgaatttaaaccgctggagaaaggctacggcgtcacgatcggcaacgct
ttgcgccgcatcctgctgtcgtcgctggagggctatgccatcacgtcggttcgcaccagc
agcgtactgcacgagttcatgaccatcgaaggtgtgattgaggacatgtccgaaatcatt
ctcaacctgaagcaagtgcgcttcaaaaaggtgagcgacgccatcgaggacaaaatcacg
gtgcgcattaagggtcaggaaaccttcacggctggcgacattagcaaattcactaatggc
ttccaggtgctaaacccggacctagtgatttgccacgtggacgccaacaccgagctggaa
ttcgaattcacgatccagaaaggccgtggctacgttcctgcagaggaaaacaagcctgcc
gatcaggttttcggtcagattgccatcgatgccattttcacgccaatcaaaaacgtgaag
tacagcattgaaaacactcgtgttgagcagaagaccgattacgagaagcttctcatcgag
attcacacggacggttctatccacccggaggatgcgctgaaaggtgccgccaatatcctg
attcaacacttcatgctgttctccgacagcaccatgactttcgaaacagccaaggctgaa
gaagaggaaacggtagacgaggagacgctgcacatgcgcaaagttctgaaaacgccactg
gcggatatggacctgagcgtacgtgcgtacaactgcctcaaggctgccgacatcaaaacc
ctcggtgatttggtgcagctggacatggcggatatgatgaagttccgcaacttcggcaag
aagtcgctcaccgagctggaaaaccttgtagaagagaaaggcctgaacttcggcatggat
ctgagcaagtataagctcgacgaagaatag
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