Hymenobacter sediminicola: H4317_04515
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Entry
H4317_04515 CDS
T09117
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hsk
Hymenobacter sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Big_12
Big_13
Por_Secre_tail
BNR_assoc_N
fn3
Laminin_G_1
Laminin_G_2
Ig_DSCAM-DSCAML_C
3keto-disac_hyd
NAR2
Motif
Other DBs
NCBI-ProteinID:
QNH63077
UniProt:
A0A7G7W9N4
LinkDB
All DBs
Position
complement(1049244..1055810)
Genome browser
AA seq
2188 aa
AA seq
DB search
MKTLLRYLLLLPLLLSAWRGQAQTYVELQKESFEVLITDASSQVDVANTLQLTTATSGNN
DSYYRRTSNATIATDAPGFSGSSSAPVVLPSGGALDGSFYWAGEAVKGTGGTPSTAVRNG
GKVTLKPVNIAGYASLQVKLAIMLGRSTRAYDRMEQDDTLRVQVRYNGAGAWETVGQLMG
DNSASAGAGNWRIDSNFNNQSADDVALGSQVVTANPMVDFTFSVNGTGSTMQTRVVVATQ
GASEEFAFDNIRVMGVLSNNLTPSLTIDPTALTYTEGDPATVVAPTLTVSDGNDANLISA
QVSISQNFDTSEDRLLFTNQNGIAGLYNTGTGVLSLSGSSSKANYEAALRSVRYQNIDVL
DPLGLARKVRFTVTDPAGATSTGVERTINVVPTLALVGMPYLEDLTTDGEGNRYTSTYFT
QTQSGTSAAFTRTSTNPNTQNTPAAQQTTFGNISNSWYWYSNVTGNNSFRQPFYIGSFQT
QPINTAGYANLSFNLRLGARAGAFDVSDYIKIYYRSNEGAWVLLGQFRGSSSADADMKQD
LNVASIGATPTGPSLTPSLASFPFGLPASVNGTKLDFKIETYSNVADEQIAFDLLQLTGT
LVVAPTVATAAATTITGTSALLGGNVTADGGATVSERGVVYSTTNTTPTTSNTKVQIGSG
TGTFSQALTGLTPGTTYYVRAYAINTAGTGYGTVQPFTTTPNAPVVVSPPNGSTTNANTP
TYLGTATANSTVTVYVRPSGGSFASIGTTTTSASGSWTLTQPTALPDGSTAVYATATIGT
SAVSANSNTNTFTIDTTVPTATIVRQTPSATTTNATSLVFRVTFNESVFGVSASSFVLNT
TGTTGTIASATVVTGSTVYDVTVNTVSGNGTLGLNLKGSGSGVADNAGNVPAGVTGPVYT
IDQTVPTVAISSSAGATGSTTTTSPIPFTVTFSENVTGFVAGDITVTNGSITGGVVNGVS
PGTTYTFTVTPNTPGTASTVTVPAAVAQDAAGNANTAAPSSFSITYNLPNATVTSVTRLT
PSPTATASVQYQVVFSASVTGFSAANLTVTPTGTLSGLSVIGVSGAGTTYTVVLGTGTGE
GTLRLNVQNSTGISPTVTNVPYTSGETYSIVKSFPVAPLLTVRGAGSASGNYTDVTAFVD
LLQVVQNGTNTTVANGLQNGSFESNNVLAAAGSFLYAPSAVASAWTLGTQTGVSRNGTTN
FSSTAADGTAVAFLQNGGPNSSVAQNLAVPTGSYQVTFGTRQRSNNGPSDQVLNVFLNDG
ANNVFIGTIQPTSYSTYQYFTSAAFSVTAPPLTAIVSTTSASPTSTSPIPFSVSFSQSVG
TSFTDTDVTVSNGSVTTSSFSGSGSGPYTFTVTPTGNGTVTVSLAAGVANDANNTGNLAS
NSVSVQYNQPVTPAPVVTIPSNGATTNSNPTSVGSAVVGSTVRVYIDGVQVGTDITPNSG
GTWIRTFSGTPLTRGTHTVYATAQLPGQQVSAPSPTNTFTVQVPATYTSGTADQPNISRV
PAGSTNQEILRVAIVIDGGPDAPLSATSFSFDTPGSSAPSVDIDAARVYYTGTSGTFAAT
TQFGSTLNSPSGPFTITGNQQLSTGTNYFFLVYDVDANATSGNLLDATMTSLTVGGTART
PSVTDPAGNRQIVNTSRVAGTALRFTGNATAGYVDFSASPTQAPLLNGSYTQAVWIKPAI
GTSSTNYYVLGNGTGNSAAPYIYVSGNGRIGAGFGTGSATVNQQTSPNNIPANAWHHVVA
TYNGSVLLVYLNGELVINASASGTPASTRVNFVGNVAASGSSNFPGDIDEVSQWSRALSQ
TEVRLLRHLTLDGLETGLVSYLQFNDSGTTTTDGISGAVGTLTGATRVTSTAPVGYGTSF
LRSVTAMGNYNFTGTNAAINFTSVSGAPYEVVVTRLEGSPLGTQVIDPAIRSRHARAYWI
VDKYSTSNFAATVTYTLDPGLISAGDAAAPSNLKVYKRDSNSDGTFESPISATAANTTAS
TVTFPVTSFGQNFIATYGSSPLPVELIRFTAERRNNDALLQWATAQELNNDYFEVESSVD
GRTFRAIGRVAGHGTSSQPHAYQLIDVNLARYARSVVFYRLRQVDQDGTSTLSSVQTVLV
PNEASSLTAVVFPNPAADQLTVRLSRPYTGKAQGWLFDTQGRTVQELNPPLATSPDINLS
VAYLPNGVYTLRLVLDGQVIHQQIVVQR
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcttacgctatttattgctgctgccgctgctgttatcggcttggcgaggc
caagcacagacatacgtcgagctccagaaggagtcgtttgaggtactcattaccgatgcc
agctcgcaagtagatgtggctaacacgctccagctaactactgctaccagtggtaacaac
gactcgtactaccgacgcacctccaatgctactattgcaacagatgccccagggttcagt
ggcagttcgagtgcgccggtcgtgctgcccagtggtggtgcgctggatggctctttctac
tgggcaggcgaggcagtgaaaggaaccggtggcacgcctagcacggccgttcggaacggc
ggaaaagtaaccctgaagccagtaaacattgcgggctatgcctccctgcaagtgaagctc
gccattatgctgggccgttctacccgagcctatgaccggatggaacaggacgatacgcta
cgcgtgcaggtgcgctacaacggtgctggtgcctgggaaacggtaggccagctgatgggc
gacaactcagctagcgcaggcgcaggtaactggcggatagacagcaacttcaacaaccaa
tcggcggacgacgtagcattgggctcgcaggtggtgacggccaatccgatggtcgacttt
acgtttagcgtcaacggtaccggctcgacgatgcaaacgcgggttgtggtagcgacacaa
ggcgcctccgaggagtttgccttcgacaacattcgggtaatgggggtactaagcaacaac
ttgactccgtcattaaccatcgacccaacggcgttgacatacacggagggcgacccagct
actgttgtagcccctaccctgacggtaagcgacggcaacgatgccaacctaatcagtgcc
caggtgagcataagccagaactttgatacctcggaagaccggcttctattcaccaaccag
aacggtattgcgggcttgtacaacactggcacaggagtactgagcctttcgggctcctct
tcaaaagcaaactacgaagccgccctgcgctccgtgcggtaccagaatatcgatgttctg
gatccgctgggactagcccggaaagtccgtttcacagtaaccgatccggccggagcgact
agcacgggcgtagaacgcaccattaacgtagtgcccacgctggctctagttgggatgccg
tacctggaagacctgaccaccgacggggaaggcaaccgctacacctccacctacttcacc
caaacccagagcggcaccagcgcggcatttacacggaccagcacgaacccgaacacgcaa
aacaccccggcagcacagcaaaccacgttcggcaacatcagcaactcgtggtactggtac
tccaacgtgacgggcaataacagcttccggcagcctttctacatcggctccttccagacg
cagcccatcaacacggccggctatgctaacctgagcttcaacttgcggctgggcgcccgc
gccggcgcgttcgacgtgtccgattacattaagatttactatcgcagcaacgaaggcgca
tgggtgctgctcgggcagttccgcggcagctcgtcggccgacgccgacatgaagcaggac
ctgaacgtggccagcatcggggccacgcccaccggcccttcgctgacgccctccctggct
tcttttccctttggcttgccagcctcggtaaacgggaccaagctcgatttcaaaatagaa
acctattccaacgtcgccgacgagcaaatagccttcgacctgctgcagctgacgggcaca
ctggtggtagcgcccaccgtggcgacggccgcggctactaccatcacgggcactagcgcc
ttgcttggcggcaatgtgacggccgacggcggcgcaacggtgtcggagcgtggcgtggtg
tatagcaccactaacaccacgcccactaccagcaacaccaaagtacagattggctcgggt
acgggtactttctcacaagccctgacgggcctgacgcccggcaccacctactacgtgcgg
gcctacgccattaataccgccggcactggctacggaacggtgcaaccctttactaccacg
cccaacgcgccggtggtggtaagccctcccaacggctcgaccaccaatgccaatacgcct
acctacttgggcacagccacagccaacagcacagtaactgtgtatgtgcggccgagcggc
ggcagctttgccagcattggcaccaccacgaccagcgcctctggcagctggaccctaacc
cagcccacggccctaccagatggttcgacggcggtgtacgccacggctaccattggtacc
tcggcggtcagcgccaacagcaataccaacacgttcaccatcgatacgacggtgccgaca
gccacgatagtgcgtcagactccatcggcgacgaccaccaacgccacctcgctcgtcttc
cgtgtaacgtttaatgaaagtgtatttggggtaagtgctagcagcttcgtgctgaacacc
acaggaaccacgggcaccattgccagtgccacggtcgtgaccggcagcaccgtctatgac
gtgacggtgaacactgtgagcggcaacggcacattaggccttaacctgaaaggctccggc
tcgggtgtggccgacaacgccggaaatgtcccggccggcgtcacgggcccggtctacacc
atcgaccagacagttccgacggtggctatcagctcgtcggccggcgctaccggcagcacg
accacgacctcaccgattccgttcacagtaaccttctccgaaaacgtgacgggctttgtg
gctggcgacataacggtgaccaacggctcgattaccggcggtgtcgtcaatggcgtcagc
cccggcaccacctacactttcacggtgacgccaaacacgcccggcacggccagcacggta
accgtaccggctgcagtagcccaggacgcggctggcaacgccaataccgctgccccctcg
tcgttcagcatcacctacaacctgcccaacgccacggtcacctcggtgacgcgcctgacc
ccctcgcccacagcaacagcctccgtccagtatcaggtggtcttctcggccagcgtgacg
ggattttcagcggcaaatcttaccgtgacgccgaccggcaccctgagcggtttgtccgtc
attggcgtttcgggcgcaggcacaacctacaccgtagtgctgggcaccggtaccggcgaa
ggtacgctacgcctgaacgtgcagaacagcaccggtatttcacctacggtgactaacgtg
ccctataccagcggcgagacatacagcatcgtcaagagcttcccggtcgcgccgctactc
actgtgcggggagccggctcagccagcggcaactatactgacgtgacggccttcgtggac
ctgctgcaagtggtacagaacggcaccaacacgaccgtagccaacggcctgcagaacggc
agctttgagagcaacaacgttctggcggcggcgggcagcttcctgtacgcaccctccgca
gtggctagtgcctggacgcttggtacgcagaccggcgtatcgcgcaacggcaccaccaac
ttcagctcaacagctgctgacggcactgcagtggccttcctgcaaaacggggggcccaac
agcagcgtggcgcaaaacctagccgtgcccacgggcagctaccaagtgaccttcgggacc
cggcagcgcagcaacaacggcccgagtgaccaagtgctgaacgtattcctcaacgacggg
gccaacaacgtgttcatcggcaccattcagccgacctcctacagcacataccagtacttc
acttcggccgcgttcagcgttacggccccgcccctgacggctatcgtcagcaccacttcg
gccagccccaccagtacgtcgccgattcctttctcggtgagtttctcgcagagcgtgggc
accagcttcactgatactgacgtgacggtcagcaacggctcggtgactacgagcagcttc
agcggcagcggcagtggcccctacaccttcaccgtgacgcccaccggcaacgggaccgtg
acggtaagcctggccgctggtgtggccaacgacgccaacaataccggcaacctggccagc
aactcggttagcgtacagtacaaccagcccgtgacgccggctccggtcgttaccatcccc
tccaacggcgccacgaccaacagcaatcctacgtccgttggctcagcagtggtcggcagt
acggtacgagtgtacatagacggagtccaggttggcactgacatcacccccaactcgggc
ggcacctggatccggaccttctccggcacgcccctgaccagaggtacgcacacggtgtac
gccacggcccagctccccggccagcaggtgagtgcccccagccccaccaacaccttcaca
gtgcaggttccggccacctacaccagcggcacagccgatcagcctaacatcagccgcgtg
ccggcaggcagtaccaatcaggagattctgcgtgtggcaatagttatcgacggcggcccc
gacgccccgttgagtgccacctcgttctcattcgacacccccggcagcagcgccccaagt
gtggacatcgacgcggcccgggtgtactacaccggtacgagcggcaccttcgccgccacc
acccagtttggcagcaccttgaacagccccagcggccctttcaccatcacgggcaatcag
cagctgtccaccggcacgaactactttttcctggtgtacgacgtggatgccaacgccacc
agtggcaacctgctcgatgccacgatgacgagcctgaccgttggcggcacggcccgcacg
cccagcgtgacggacccagccggcaaccgccagatcgtaaataccagccgggtggctggc
accgcgctgcgcttcaccggcaacgccaccgctggttatgttgacttcagcgccagcccc
acgcaggcgccgctactgaacggctcgtacacgcaggcagtatggatcaagccggccatc
ggcacgagtagcaccaactactacgtgctgggcaacggcaccggcaactcggccgcacct
tacatctacgtgagcggcaacggtcgtatcggcgcgggcttcggtacgggcagcgccacg
gtaaatcagcaaaccagccccaacaacatcccggccaacgcgtggcaccacgtggtggcg
acctacaacggtagcgtgctgctagtgtacctcaacggggaactggttatcaacgcttcc
gccagcggcacgccggccagtacccgcgtcaacttcgtgggcaacgtggccgcctcgggc
agcagcaacttccccggcgacatcgacgaggtcagccagtggagccgggcgctaagccag
acggaagtccgcctgctacgccacctcacgcttgatgggctggaaacaggcctggtgtcg
tacctgcagttcaacgacagcggcactactaccaccgatggcatcagcggcgcagtgggt
acgctgacgggcgccacccgcgtgaccagcaccgccccggtgggctacggcaccagcttc
ttacgttctgtaacggccatgggcaactacaatttcacgggtaccaacgctgccatcaac
ttcacctcggtatccggtgcgccgtatgaggtagtcgtaacgcgcctagaaggctcgccc
ctgggtacacaagtaattgaccctgccattcgcagcagacacgcccgggcctactggatt
gtcgataagtacagtaccagtaacttcgcggctactgttacttacaccctcgacccaggc
ctgattagtgcgggtgatgccgcggctccttctaacctgaaggtctacaaacgggacagc
aacagcgacggaacctttgaatcgcctatttcagctacggccgccaacaccacggccagt
acggttacgttcccagttacctcgttcggccagaactttatcgccacttatggcagctca
ccgctgccagtagagctgatacgcttcacggcagagcgccgcaacaacgacgcactgctg
cagtgggctaccgctcaggaactcaacaacgactacttcgaggtggagagcagcgtggat
gggcgcacgttccgggccattggccgcgtggcgggccacggcaccagcagccagccccat
gcgtatcagcttatcgatgtcaatttggcccgctacgcccgttcggtggtgttttaccgc
ctgcgccaagtagatcaggacggcaccagcaccctttcctctgtgcaaacggtgctggtg
cccaacgaagcgtcgtcgcttacggcagtggtgttcccgaacccggcggccgaccagctg
accgttcgtctcagccggccatacactggcaaggcgcagggatggctatttgatacccaa
ggccgaactgtgcaggagctcaatcccccgctggctactagtccggatatcaatctgtcg
gtagcgtatctccctaatggagtatataccctccgtctggtactggatggccaggtaatt
caccagcagattgtggtgcaacgctaa
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