Hymenobacter sediminicola: H4317_05410
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Entry
H4317_05410 CDS
T09117
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
hsk
Hymenobacter sediminicola
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsk03000
]
H4317_05410
Transcription factors [BR:
hsk03000
]
Prokaryotic type
Helix-turn-helix
XRE family
H4317_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
Peptidase_M78
ScfRs
HTH_25
HTH_20
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
QNH63245
UniProt:
A0A7G7WA52
LinkDB
All DBs
Position
complement(1263333..1264817)
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AA seq
494 aa
AA seq
DB search
MLSHSQVVRLIFGLKLRELRQERGFTPAELARACDVSVSYLNEIEKGKKYPKADKILGLS
KVLGVSYDQLTSLTLSRRLEPISELLQSDLLKEFPLEMFGLDPLRIVELIADAPAKMNAF
ISTIFEIARNYEMRQESFFLAALRSYQEMHDNYFEELEQDVRTFCGEQNLNTQAPFDTRQ
LERVLVEKYGYTLNRQKLAEYASLGRLRSVFQPKTRTLLLRPGLSKAQEAFVLGREVAFN
YLGLKERPYVNATFPVHSFDEVLNNFKASYFAGALLMEEESLVRDLQDFFGQTTWQPARL
QAMLTKYDVSPEMFMQRITNLLPRYFGIQSLFFLRFDQPDAEAAYLLSKELHLSRLHNPH
GNELHEHYCRRWIAIWLIQEARHKAQLETPAFSMGAQRSRYPNEDEYLCLSLARAGAPGE
PAVSVTVGLLCDDNLRQKVQFLDDPAIIQKRVNETCERCSIPDCEVRAAPPVEIARRQRQ
REAADAIAALVNGG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctaagccacagccaggttgtccggttgatatttggattgaaactgcgcgaattgcgc
caggaacgcggatttactcccgctgagttggcccgcgcctgcgacgtatcggtatcctac
ctgaatgagatagagaagggcaaaaagtacccgaaagccgataaaatactgggtttgagc
aaggtactgggcgttagctacgaccagctgacttccttgacgctaagccggcggctggag
ccgatttcggagctgctgcagtcggatctgctgaaggagtttccactggagatgttcggg
ctggacccgttgcgcatcgtggagctgattgccgatgcgccggccaagatgaacgccttc
atcagcaccatcttcgaaatagcccgcaactacgaaatgcgccaggaaagcttctttctg
gcagcgctgcgctcctaccaggaaatgcacgacaactattttgaggaactggagcaggat
gtgcgcactttctgcggcgagcaaaaccttaatacgcaggcccccttcgatacccggcaa
ctggaacgggtgctggtggagaagtatggctacacactcaaccggcagaagctggccgag
tacgcctcattgggacggctccggtcggtgtttcagcccaaaacccgcacgctgctgctg
cggccgggcctgagcaaagcgcaggaagccttcgtactgggccgcgaagttgccttcaat
tacctcggccttaaggagcggccctacgtgaatgccaccttcccggtacattcgttcgat
gaggtgctcaacaacttcaaggcctcctactttgccggcgcgctgctgatggaagaagaa
agcctagtgcgcgacctgcaggactttttcgggcaaaccacctggcagccggcccgcctg
caagccatgctcacgaagtatgatgtgtcgccggagatgttcatgcagcgcatcaccaac
ctgctgccacgctatttcggtatccagagcttgtttttcctgcgcttcgaccagcctgat
gccgaagcggcatacttgctgagcaaggagttgcacctctctcgcctgcacaacccgcac
ggcaacgaactgcatgagcactattgccgccgctggattgccatctggctgattcaggag
gcccggcacaaggcgcaacttgaaacgcctgctttcagtatgggtgcccaacgctcgcgc
taccccaacgaggacgagtacctgtgtctgtcgttggcgcgggccggggcccctggcgaa
ccggccgtgagcgtaaccgtgggcctgctctgcgacgataacctgcgccaaaaagtgcag
ttcctcgatgatccggccattattcaaaagcgcgttaatgaaacgtgtgaacggtgttcc
attccggattgcgaagtccgggcagcaccgcccgtggaaatagcgcgccgccagcgccag
cgcgaagccgccgacgctattgcggcattagtgaatggcggctaa
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