Hymenobacter sediminicola: H4317_05470
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Entry
H4317_05470 CDS
T09117
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4317_05470 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_05470 (priA)
Enzymes [BR:
hsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4317_05470 (priA)
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4317_05470 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
UPF1_Zn_bind
AAA_30
TsaE
nSTAND6
Zn_ribbon_6
zf-HYPF
Zeta_toxin
HypA
AAA_16
AAA_22
YgaB
Motif
Other DBs
NCBI-ProteinID:
QNH63256
UniProt:
A0A7G7WA63
LinkDB
All DBs
Position
complement(1277656..1280205)
Genome browser
AA seq
849 aa
AA seq
DB search
MSLTFDFVQPQPEPAADRVTLFADVILPLPLPKLYTYRVPFELNDQVVIGGRVIVQFGAK
RTLSCIVAAVHETPPKDYQAKYILEFIDDSPVVTQPQLKLFRWMADYYLCTLGEVINAAL
PAALKLNSESRIQLHPVWMNTDEADRYPLSEQEQKVVTTLLDGEEGKSMTFTEVGDVLGI
ASFHKVIKSLMHKDVIFLFEHLADKYSPKVVKKVRLAHHFVAEAALEGLFAQLASKAKQL
DVLMRYLQKVPVYQNEHANHAGIEKAYLTSAPHLSPSAVNTLIKNGVLEQFDQIVSRFPL
DDATEANMHFKLSEAQQTAHDDILDQFQTKDIVLLHGVTGAGKTEIYIELIRQALDGGGQ
VLYLLPEIALTAQIVTRLMRVFGSRLGVYHSKFSDNERVEVWNGVLSGRFQVVVGVRSSV
FLPFDNLALTIVDEEHESSYKQYDPAPRYNAREVALMMANFQGSKTLLGSATPAVETYYQ
TRAGRYGLVTLTKRYGEAGLPEIELVDTRKARESKTLLNHFTPELMAEMESKLAQKEQVI
LFQNRRGYAPFINCLDCGWIPKCTNCAVSLSYHKQAHELRCHYCGHHDRMPVQCPACGSR
NVKTVGFGTEKIEDDLKVMLPQANVQRMDLDTTRAKNAYQQIISDFEQQTTNVLVGTQMV
TKGLDFANVSLVGIINADSIIHYPDFRAHERAFQMFVQVSGRAGRKGKKGKVIIQTADPQ
QVIFDKVMRNDYLEFYEYEITQRREHGYPPFMRIIRLTVKHMDQVLAERAAILLTGELVA
RLGREAVLGPEAPYIFRIRNFYLQEITIKLSREHTVLKAAKADILDAINNIRDQKDYKQA
RFVTDVDPM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttacgttcgactttgttcaaccgcagcctgagccggccgccgaccgtgtcacg
ctcttcgccgacgtgattctgccgctgccactgcccaagctgtatacctaccgcgtgccc
ttcgagctgaacgaccaggtcgtgattggcgggcgcgtgattgtgcagtttggggccaaa
cggactctgagttgcattgtggctgctgtgcacgaaacgccgccaaaagactaccaggcc
aagtacattctggagttcattgatgactcgccggtagtaacgcagccgcagctcaagctt
ttccgctggatggccgactattacctatgcacactgggcgaggttataaacgccgcgctg
cctgccgctctcaagcttaattccgaaagccgcatccagctgcaccccgtgtggatgaac
accgacgaagcagaccggtacccactgagtgagcaggagcagaaagtagtaactacgttg
ctcgatggtgaagaaggcaagtctatgacgttcacggaagtaggcgacgtgctcggcatt
gcctcctttcacaaggtcatcaagagcctgatgcacaaggatgtcatcttcttgtttgag
catctggccgataaatactcgccgaaagtggtgaagaaagtgcggctggcccaccatttt
gtggcagaggcagcactggaaggcctatttgcgcaactggccagcaaggccaagcagctg
gatgtgctgatgcgctacctgcagaaagtgcccgtgtaccagaacgagcacgccaaccac
gcaggtatcgaaaaagcctacctcacgtcggcgccgcacctctccccttctgctgtcaat
acgctcattaaaaacggcgtactggaacagttcgaccagattgtgtcgcgctttccgctg
gacgatgccacggaagctaacatgcacttcaagctcagcgaagcgcagcagacggctcat
gacgacattctggaccagtttcagaccaaggacattgtgctgctgcacggcgtgacgggc
gcgggcaaaacggaaatctacatcgagctgattaggcaggcgctggacggcggcgggcag
gtgctgtatctgctgcccgaaattgccctcaccgcccagattgtaacccgcctgatgcgc
gtattcggctcgcggctgggcgtgtaccactccaaattctccgacaacgaacgggtggaa
gtatggaatggcgtgctttcgggccgcttccaagtggtagtgggcgtgcggtcctctgtg
ttcctgccctttgataatctggccctgaccattgtggatgaggagcacgagtcgagctac
aagcagtacgacccggcaccgcgctacaatgcccgcgaggtggccctgatgatggccaac
ttccagggctcgaaaacgctgctgggctcggccacaccagctgtggaaacctattaccag
acccgcgccggccgctatggcctcgtgacgctcactaagcgctatggcgaggccggtttg
ccggaaattgagctggtggacacccgcaaagcccgcgaaagcaaaacgctgctcaaccat
ttcacgccggagctgatggccgaaatggaaagcaagctggcccagaaggagcaggtaatt
ctattccagaaccgtcgtggctatgcccctttcatcaactgccttgactgcggctggatt
ccaaagtgcacgaactgcgctgtgagcctgagctaccacaagcaggcccacgagttgcgc
tgccactattgcggccaccacgaccggatgccggtgcagtgcccagcctgcggctcgcgt
aacgtcaaaaccgtggggtttggcaccgagaagattgaggacgacctgaaggtgatgctg
ccccaggccaacgtgcagcgcatggacctcgacacgacgcgcgccaaaaacgcctatcaa
cagattatttccgacttcgagcagcagactaccaacgtgctggtgggcacccagatggtg
acaaagggcctggatttcgccaacgtaagtttggtgggtattatcaacgccgactcaatc
attcattatcccgatttccgggcgcacgagcgggctttccagatgtttgtgcaggtgagc
gggcgggccgggcgcaagggcaagaaaggcaaggtcatcatccagactgccgacccacag
caggtcatcttcgacaaggtgatgcgcaacgactacttggaattctacgagtatgagatt
acgcagcggcgcgagcatggctacccgccgtttatgcgtatcatccggctcacggtgaag
cacatggaccaagtactggccgagcgggcagctattctgcttaccggcgaacttgtggcc
cggctgggccgcgaggcggtgctagggcccgaagcgccttatatcttccggattcgcaat
ttttacctgcaggaaattaccatcaagcttagccgggagcatacagtactcaaagccgcc
aaagccgatattctggatgccatcaacaacatccgcgaccagaaggactacaaacaggcg
cgcttcgtaaccgatgtcgaccccatgtaa
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