Hymenobacter sediminicola: H4317_08215
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Entry
H4317_08215 CDS
T09117
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H4317_08215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_08215
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
H4317_08215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DUF4686
XRN1_D2_D3
Motif
Other DBs
NCBI-ProteinID:
QNH63764
UniProt:
A0A7G7WBM1
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All DBs
Position
1945201..1947618
Genome browser
AA seq
805 aa
AA seq
DB search
MILPQNFEQKIGFAQLREMLEGLCLSPLGRQFLAKMSFQTKHDQLQKLLLQTDEFRFLLH
SGADFPSQHYHDVNPQMVRASLPGAYLDVAAFFAVKMSLRTIRQALTFFTQAPEDLYPTL
RLLGIGVQVDRNLLAALDKVVDDEGQVRDDASPLLRQLRQELITRQGLLRKQIAGILRHA
KNEGWVPDGAEPTIRGGRLVLPVIAEHKRRVKGLIHDESASGQTVFIEPEAVFELNNDIK
DLENAYQRELIRILTALTDQLRPHIPDLRKAYQYLGLLDFIRAKALLALRLEATLPALHP
RPQMLWKRVRHPLLYLAFQNHAKDDPREVVPLDIELTPEQRILLISGPNAGGKSVSMKTV
GLVQYMLQCGLLIPAGEGSEAGMFDDIFLDIGDEQSLENDLSTYSSHLLSMKQFVTLAGK
RSLILIDEFGTGTEPVLGGAIAESVLEQLNRARSFGVITTHYTNLKNYAERTPGIVNGAM
RYDPEQLQPLYRLEIGKPGSSFAIEIARKIGLPKQLVERATQLVGKDKIRYDRLLEGLEK
EKADLEARTAEAAKQERRLKKAAQEYQDLKKYLDDTTLEVLREAKQKAKLLLRDTNQQIE
ATIQEIRLGQADKEKTKEARGKLDTFVREKLQIEPPKPKATRELAEAGTLKVGDKVALIG
QEGYGELMSVKGKTAEVSFGGMKTIVKIGQLEKLTRSEIREREKEAARKAPSQYAGFDTT
GKMSSFSPTLDLRGERAEDALTKITAYVDDAVMLGVPEIKILHGRGNGVLRQVVRDYLHR
TRQVASVADEHADRGGDGATVAVLK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgattcttcctcagaatttcgagcagaaaataggcttcgcgcagctgcgcgagatgctg
gaaggcctgtgcctgagcccgctcggccgccagtttctggccaagatgagcttccagacc
aagcacgaccagctccagaagctcctgctccagaccgacgagttccgcttcctgctgcac
agcggagccgacttcccctcccagcactaccacgacgtaaacccgcaaatggtgcgggcc
agcctgcccggcgcctacctcgacgtagcggccttctttgccgtgaaaatgagtctgcgc
accattcggcaggccctcaccttcttcacccaggcccccgaagacctgtacccgaccctg
cgcctgctcggcatcggggtgcaggtagaccgcaacctgctggccgccctcgacaaagtg
gtggacgacgaaggccaggtgcgcgacgacgcttcgccgctgctgcgccagcttcggcag
gagctgattacgcgccaaggcctgctgcgcaagcagattgccggcatcctgcgccacgcc
aaaaacgaaggctgggtgcccgatggggccgagcccaccatccggggtggccgtttggtg
ctgcccgttattgccgagcacaagcgccgcgtgaaaggtctgattcacgatgagtcggct
tcggggcagacggtgtttatagagccggaagccgttttcgagctgaataacgacatcaag
gacctcgaaaacgcctaccagcgggagctgatccgcattctgacggccctcaccgaccag
ctgcgcccgcacattccggacctgcgcaaagcctaccagtacctcggcctgctcgacttt
atccgggccaaggcgctgctggcgctgcgcctggaagccacgctgcccgcgctgcacccg
cgcccccagatgctgtggaagcgggtgcgccacccgctgctctacctcgcgtttcagaac
cacgccaaggacgacccgcgcgaagtggtgccgctcgatattgagctcacgccggagcag
cgcatcctgctgatttcggggccgaatgccggcggtaaatccgtgagcatgaaaacggtg
gggctggtgcagtacatgctgcagtgcggcctgctgattccggccggtgaagggtcggag
gcgggcatgttcgatgatattttcctcgatatcggcgacgagcagagcctggaaaacgat
ttgagcacgtactcgtcgcacttgctgagcatgaagcagtttgtgacgctggccggcaag
cgcagcctgattctcatcgacgaattcgggacgggtaccgagccggtgctgggcggcgcc
attgccgagtcggtgctggagcagctgaaccgggcgcgcagctttggggtcatcaccacg
cactacaccaacctcaagaactacgctgagcgcacgcccggcatcgtgaacggggctatg
cgctacgaccccgagcagctgcagccgctctaccgcctcgaaatcgggaagccgggctcg
tcgtttgccatcgaaattgcccgcaaaatcggcttgccgaagcaactcgtggagcgcgct
acacagctggtgggcaaggacaaaatccgttacgaccggctgctcgaaggactcgaaaag
gaaaaggccgacctagaagcccgcaccgccgaagccgccaagcaggagcgccgcctcaag
aaagccgcccaggaataccaggacctgaaaaagtacctcgacgacaccacgctggaagta
ctgcgcgaagccaagcagaaagccaagctgctccttcgcgacaccaaccagcagattgag
gccactatccaggaaatccgcctcggccaagccgacaaggagaagaccaaggaggcccgc
ggcaagctcgatacgtttgtgcgcgagaagctgcagattgagccgcccaagcctaaagcc
acccgcgagctggccgaagccggtacgctcaaagtcggcgacaaagtggcgctgattggg
caggaaggctatggcgagctgatgagcgtgaagggcaaaaccgccgaggtgagcttcggc
ggcatgaaaaccatcgtgaaaatcggccagctcgaaaagctgacacgctccgaaattcgg
gagcgggagaaggaagcggcccgcaaggctccgtcgcagtacgcgggctttgatactacg
ggcaagatgtccagcttcagccccacgctggacttgcgcggcgaacgggccgaagatgcc
ctcaccaaaatcacggcttacgtagacgatgccgtgatgctgggcgtaccggaaatcaag
attctgcatggccgcggcaacggcgtgctgcgccaggtggtgcgcgactatctgcaccgc
acccgccaggtggccagcgtcgccgacgagcacgccgaccggggcggcgacggcgccacg
gtggccgtgctcaagtag
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