Hymenobacter sediminicola: H4317_09775
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Entry
H4317_09775 CDS
T09117
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsk
Hymenobacter sediminicola
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsk03032
]
H4317_09775
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_09775
Enzymes [BR:
hsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4317_09775
DNA replication proteins [BR:
hsk03032
]
Prokaryotic type
DNA Topoisomerases
H4317_09775
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4317_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNH60493
UniProt:
A0A7G7W2A0
LinkDB
All DBs
Position
complement(2311832..2312959)
Genome browser
AA seq
375 aa
AA seq
DB search
MSASATTHARPKTRKKHLLPLEEAHELYKDPARQAELAGLRYQTDTKPGITRKATRNGNF
GYYTAQGEKIMDEKVLSRIQSFVIPPAWTEVWISPSPNSHLQVTGRDAKGRKQYLYHAAW
DQARALTKFSRLRAFGEKLAELRAQMHKDLARPQLDKQKVMALVLTLMDKSFIRVGNREY
AEKNKTYGLTTLRDKHVQVTGADVRFAFVGKKGVAHDLTLHDRKLARLVLKCKEIPGQHL
FQYYSTDGQRQELESGDVNEYLQQVTGMKLSAKDFRTWGGTVKMVECLERVLDEEPDFPK
PKTLKRALKDVAHDLGNTPTVCSKYYIHPQVMELFNSDKLIDYLRRHDADPAENDLLTPT
EHMVLDMLAELEKAK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttctgccactacccacgcccgccccaaaacccgcaaaaagcacctgcttcct
ctggaggaagcgcacgaattgtacaaagatcctgctcgtcaggccgagctggctggcttg
cgttaccaaaccgataccaaaccgggtatcactcgcaaagctacccgcaacggtaatttt
ggctactacaccgcgcagggcgagaaaattatggacgagaaagtgctcagccgtatccag
agcttcgtgattccgccagcctggacggaagtctggatttcgccttcgcccaacagccat
ttgcaggtaacgggccgtgacgcgaaaggccgcaagcaatacctctaccatgccgcctgg
gaccaagcacgtgccctcaccaagttcagccggttgcgggctttcggggaaaagctggcc
gaactgcgggcccaaatgcataaggacctggcccgcccgcagctggataagcaaaaggtg
atggcgctagtgctgacgctcatggacaaatcattcatccgggtcggcaaccgtgaatac
gccgaaaagaacaaaacctatggcctcacgactctgcgcgacaagcatgtgcaggtgaca
ggagccgatgtccgctttgcttttgtgggcaaaaaaggagtagcccacgacctgactctg
cacgaccgaaagctggcccggctggtgctgaaatgcaaggaaataccaggccagcacctg
ttccagtactacagcaccgatgggcaacgccaggagctggaatcgggtgatgtaaatgag
tacctgcagcaggttacgggcatgaagctttcggcgaaggactttcggacctggggcggc
accgtaaaaatggtggaatgcctggagcgggtactggacgaagagccggacttccccaag
cccaagacgctgaagcgcgctctgaaagacgtggcccacgatctgggcaacacacccact
gtgtgctccaaatactacatccatccgcaggtgatggagctgttcaactcggataagctc
atcgactacctgcgccgccacgacgcggaccccgccgaaaacgacctgctcacgcccacc
gaacacatggtgctggacatgctggccgagttggaaaaggcgaaataa
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