Hymenobacter sediminicola: H4317_10865
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Entry
H4317_10865 CDS
T09117
Name
(GenBank) HAMP domain-containing protein
Organism
hsk
Hymenobacter sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP_2
HAMP
MCPsignal
ATG17_like
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
QNH64140
UniProt:
A0A7G7WCP7
LinkDB
All DBs
Position
complement(2551092..2555390)
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AA seq
1432 aa
AA seq
DB search
MNVDDDTVGDITRRSGSAKGSNVRSSGTLENADYINEQLNRVLYALDAFKKGDVSVRLTK
QNNDIFAEIAEAYNSMVEMIGGVGGEVSRISKVAGVEGNLKARASADNAAGFWRDMINNI
NGLVDSIAVPVLEVGKVLKNISKGNLDETFQIPVSGDFKVMAETINKTIDNLNLFAGEVT
RVAQEVGTEGKLGGQASVPNVGGIWKDLTDNVNYMASNLTSQVRDIANVATAVAKGDLTQ
KITVDVKGELLQLKQNLNQMVDSLNLFAGEVTRVAQEVGTEGKLGGQALVPNVSGIWKDL
TDNVNNMASNLTLQVRDIANVATAVAKGDLSQKITVDVKGELLQLKQNLNQMVDSLNLFA
GEVTRVAQEVGTEGRLGGQASVPNVAGVWKELTDNVNNMASNLTLQVRDIANVATAVAKG
DLSQKITVDVKGELLQLKQNLNQMVDSLNLFAGEVTRVALEVGTEGKLGGQADVPNVAGV
WKELTDNVNYMASNLTLQVRDIANVATAVARGDLSQKMTVDVKGEILELKNILNQMVDSL
NIFGDEVTRVAREVGTEGKLGGQASVPRVSGTWKDLTDNVNYMASNLTSQVRDIANVASA
VAKGDLTQKMTVDVKGEILDLKNILNQMVDSLNIFAGEVTRVAREVGTEGILGGQASVPN
VSGTWKDLTDNVNTMASNLTSQVRDIANVATAVAKGDLSQKVTVNVRGELLQLKENLNQM
VDSLNTFGDEVTRVAREVGTEGKLGGQADVPNVRGTWKDLTDNVNFMAASLTSQVRDIAN
VTTAVARGDLSQKVSVDVKGELLDLKDNINRMVDSLNIFAGEVTRVAQEVGTEGKLGGQA
EVPNVTGVWKDLTDNVNTLAANLTTQVRGIVKVVTGVSQGDLTQKLTLDAKGEVAELADT
INRMVDDLNRLAQEVSRVAKVAGVEGKLTERATVGGVSGSWKEIVDTLNDLLESIASPVL
EVSRVVRAISEGDLTQQVEIQTAGDIKSMADALNLAVDTLNDLLAEINDSSQVVGTSSEE
MAAKGQEMSRVTVDVALAMQQMAEGAQNQALKTDQAFKLIEEIMQATKETAGKADIGIKA
AILGEQTSQLGLKTVAEVVKNMEEISAAAAQTAKTIEVLSVRSQDISKSLGVITDIASQT
NLLALNAAIEAARAGEAGRGFAVVAEEIRKLAEGSRRSASEIGTLVDDVKKDTTSAATAI
STMEGRVLKGKNATFEASSAFKNIATSSGETLRTSRDILTATEVQKTSIGDVVKYVEEVV
AIAEQTASGTQQVAGTAKQLSTSMHELTVSSQRLTDIADDLQLGLSNFQLIEYVEDEPEP
EPLPVRRSMRQQPAAPVASTSSERMVGRRATAAAPSTTAPAPSGRRTNTAKPTTVQKPAT
ARKAKAAPEAAKPERRVRATASAASKNGNGSAAAPAASGEKTVKKAKAKASK
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgttgatgatgatactgtgggggatatcacgcgccgtagcggtagtgctaaaggc
tcgaatgtgcgcagcagcggaaccctggaaaatgccgattacatcaacgagcagctcaac
cgggtgctctatgctctcgacgccttcaaaaaaggcgacgtatcggtgcggctgaccaag
cagaacaacgacatcttcgccgaaatagctgaagcctacaattccatggtggaaatgatt
ggtggagtaggcggcgaggtgtcgcgcatttcgaaggtggccggggttgaaggcaacctg
aaagcccgtgcttctgccgacaatgccgccggtttctggcgcgacatgatcaacaacatc
aacggcttggtagacagcattgccgtgccggtgttggaggtgggcaaagtgctcaagaac
atcagcaaaggcaatctggacgaaaccttccagattccggtgtcgggcgacttcaaggtg
atggccgaaaccatcaacaaaacgattgacaacctcaacctgttcgccggcgaagtaacc
cgcgtggcgcaggaagtgggcaccgaaggcaaactcggcggccaagccagcgttccgaac
gtaggcggcatctggaaagacctgactgataacgtaaactacatggcctcgaacctgacc
tctcaggtacgggacattgccaacgtggccacggccgtagccaaaggcgacctgacccag
aaaatcaccgtcgatgtaaagggcgagctgctgcagttgaagcagaacctgaaccagatg
gtggactcgctgaacctgtttgccggcgaagtaacccgcgtggcgcaggaagtgggcacc
gaaggcaaacttggcggccaggcgctggtgcccaacgtatcgggcatctggaaagacctc
accgacaacgtaaacaacatggcctcgaacctgaccttgcaggtacgagacattgccaac
gtcgctacggcggttgccaagggcgacttgtcgcagaagattacggtcgatgtgaaaggg
gagctgctgcaactcaagcagaacctgaaccagatggtggactcgctcaacctgtttgcc
ggcgaagtaacccgcgtggcgcaggaagtaggcaccgaaggccgcctgggcggccaggcc
agcgttccgaacgtggccggtgtgtggaaggagctgaccgacaatgtaaataacatggcc
tcgaacctgaccttgcaggtacgggacattgccaacgtggccacggcggttgccaagggc
gacttgtcgcagaaaatcaccgtcgatgtaaagggcgagctgctacagttgaagcagaac
ctgaaccaaatggtggactcgctgaacctgtttgccggcgaggtaacccgcgtggcactg
gaggtaggcaccgaaggcaagcttggcggccaggccgacgtaccgaacgtggccggtgtg
tggaaggagctgaccgacaacgtaaactacatggcctcaaacctgaccttgcaggtacgg
gacattgccaacgtagccacggccgtagcccgcggtgacctgagccagaagatgacagtg
gatgtgaaaggagaaatcctggagctgaagaacatcctcaaccagatggtggactcgctc
aacattttcggtgacgaagtaacccgcgtggcccgtgaagtaggcaccgaaggcaagctc
ggcggccaagccagcgtaccccgcgtatcgggtacctggaaagaccttacggataacgta
aactacatggcctcgaacctgacttctcaggtacgggacattgccaacgtagccagcgcc
gtagccaaaggcgacctgacccagaagatgacggtggatgtaaaaggcgagattctcgac
ctgaaaaacatcctcaaccagatggtggactcgctcaacatcttcgccggcgaagtaacc
cgcgtggctcgcgaagtaggtaccgagggtatcctgggcggccaggcatcggtgccgaat
gtgagcggtacttggaaggacctcaccgacaacgtaaacacgatggcctcgaacctgacc
tctcaggtacgggacattgccaacgtggccacggccgtagcgaaaggcgacttgtcgcag
aaagtgactgtgaatgtgcgcggtgagctgttgcagttgaaggaaaacctcaaccagatg
gtggactcgctcaacactttcggcgacgaagtaacccgcgtggcccgcgaagtaggcacc
gaaggcaagcttggtggccaagccgacgtaccgaacgtacgcggcacctggaaagacctg
acggacaacgtaaacttcatggccgcttcgctcaccagccaggtgcgcgacattgctaat
gtaaccacggccgtagcccgcggcgacctgagccagaaagtatcggtagatgtaaaaggc
gagttgctcgacctgaaggacaacatcaaccggatggtggactcgctcaacatcttcgca
ggcgaagtaacccgcgtggcccaggaagtaggtaccgaaggaaagctcggtggccaggcc
gaagtaccgaacgtaacaggcgtatggaaggacctgaccgacaacgtaaacacgctggcg
gccaacctcaccacgcaggtacgcggcattgtgaaagtagtaaccggcgtatcgcagggt
gacctgacccagaagctgacgctggacgccaaaggagaagtagccgagctggccgacacc
atcaaccgcatggtggacgacctgaaccgactggcgcaggaagtaagccgcgtggccaaa
gtggctggtgtggaaggcaagctgaccgaacgcgccacggtaggcggcgtgagcggctcg
tggaaggaaatcgtggatacgctcaacgacttgctcgaatccattgcctcgccggtactg
gaagtgagccgcgtggtacgggccatttccgaaggcgacctgacgcagcaggtggaaatc
cagacggccggcgacatcaagtcgatggccgacgcacttaacctcgctgtggatactctg
aacgacctgctggcggaaatcaacgattcgtcgcaggtagtgggcacatcgtcggaagaa
atggcggcgaaagggcaggagatgagccgggtaacggttgacgtggctctggccatgcag
cagatggccgaaggtgctcagaaccaggctctcaagaccgaccaggccttcaagctgatt
gaagaaatcatgcaggctaccaaggaaacggccggtaaagccgatatcggtattaaggca
gctatcctgggtgagcaaacctcgcagctcggtctgaaaaccgtagcggaagtggtaaag
aacatggaggaaatttcggcagcagcggcccagacggccaaaaccatcgaagttctttcg
gttcgctcgcaggacatcagcaagtcgctgggcgtgattaccgacattgcctcgcagacc
aacctgctggctctgaacgccgccatcgaagcggcccgtgctggggaagccggccgtggt
ttcgcggtagtagccgaagaaatccggaaactggccgaaggctcccgccgctccgcctcg
gaaatcggcacgctggtagacgacgttaagaaagataccacgtcggccgcaaccgcaatc
agcaccatggaaggccgggtactgaaaggcaagaacgccaccttcgaggccagctcggcc
tttaagaacattgccaccagctctggcgaaaccctgcgcacttcccgcgacattctgacg
gcaaccgaggtacagaaaacgtccatcggcgacgtagtgaagtacgtggaagaagtggta
gccattgccgagcagacggcatcgggcacgcagcaggtagccggcacggccaagcagctg
tcgacctctatgcacgagctgacggtatcgagccagcgcctcaccgacattgccgatgac
ctgcagttaggcttgtctaacttccagctgattgagtatgtggaggatgagccagagccg
gaaccactgccagtgcgccggtcgatgcgccaacagccagcagctccagtagcctccact
tcgtctgagcgaatggtaggacggcgcgctacagccgctgctcctagtactactgctcca
gctccaagtgggcgccgtactaacacggccaaaccaacaacggtccagaagcctgctact
gcccgcaaagcaaaagccgctcccgaggccgctaagcctgagcgacgggtgcgggctact
gcctctgcagcttctaagaacggtaatggctcggccgcagccccagctgcatcgggcgag
aagacagtgaagaaggccaaggccaaagccagtaaataa
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