Hymenobacter sediminicola: H4317_13560
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Entry
H4317_13560 CDS
T09117
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk00020
Citrate cycle (TCA cycle)
hsk00190
Oxidative phosphorylation
hsk00650
Butanoate metabolism
hsk00720
Other carbon fixation pathways
hsk01100
Metabolic pathways
hsk01110
Biosynthesis of secondary metabolites
hsk01120
Microbial metabolism in diverse environments
hsk01200
Carbon metabolism
Module
hsk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hsk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
H4317_13560
00650 Butanoate metabolism
H4317_13560
09102 Energy metabolism
00190 Oxidative phosphorylation
H4317_13560
00720 Other carbon fixation pathways
H4317_13560
Enzymes [BR:
hsk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
H4317_13560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
GIDA
NAD_binding_8
AlaDh_PNT_C
Pyr_redox
Astro_VPg
Motif
Other DBs
NCBI-ProteinID:
QNH61190
UniProt:
A0A7G7W497
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All DBs
Position
3176051..3177985
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AA seq
644 aa
AA seq
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MFPESKIPEGPLAEKWDKHKFNVKLVNPANKRKYDVIVVGTGLAGGAAAASLAELGYNVK
AFTFHDSPRRAHSIAAQGGINAAKNYQNDGDSVFRLFYDTIKGGDYRAREANVYRLAQVS
VNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARGQTGQQLLLGAYSALSRQIAY
GKVKMYTRSEMLDVVVVDGQARGIITRNLITGEIEQHAAHAVVLATGGYGNVFYLSTNAM
YCNATAAWRAHKRGAYFANPCFTQIHPTCIPVSGDYQSKLTLMSESLRNDGRVWVPKTVE
MAERVRKGEIKPQDIAEDDRDYFLERKYPAFGNLVPRDVASRNAKQMCDEGRGVGSTGLA
VYLDFADIIKRTGAEAVSQKYGNLFAMYEKITDEDPYKQPMRIYPAVHYTMGGLWVDYNL
QTTVPGLYATGECNFSDHGANRLGASALMQGLADGYFVIPYTIGDYLASTPPKPVTTEHP
AFKQAEADVRGRISKLMSINGTRTPDDFHKHLGHLMWEYCGMARNAEGLKHAKAEIQKLR
QEFWSDLKLSGTEGELNQALEKAGRVADFLELGELMVDDALDRNESCGGHFREEYATEDG
EAKRNDDDYAYVAAWQYVADNQPEILNKEQLTFENVKLTQRSYK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggagtctaaaattcccgaaggcccactggccgagaagtgggacaagcacaag
ttcaatgtcaagctcgtaaaccccgccaacaagcggaagtacgatgtcattgtagtcggc
accggcctggccggtggcgcagcggccgcctcactggccgaactgggctacaacgtaaag
gcttttaccttccacgactcaccacgccgcgcccactccattgcggcgcagggcggcatc
aacgcagccaaaaactaccagaacgacggcgactccgtgttccggctgttttatgacacc
atcaaaggtggtgactaccgggcccgcgaagccaacgtgtaccgcctcgcgcaggtatcg
gtcaacatcatcgaccaatgcgtagcgcagggcgttcctttcgcccgcgagtacggcggc
ttgctggctaaccgctctttcggcggtgcgcaggtgagccggacgttctacgcccgcggc
cagaccggacagcagctgctgctgggtgcctattcggccctctcgcgccagattgcctat
ggcaaagtgaagatgtacacacggtccgaaatgctggatgtggtagtcgttgacgggcag
gcccgcggcattatcacccgcaacctcattacgggcgagattgagcagcacgcggcccac
gccgtggtattggctaccggcggttacggcaacgtattctacctgagcactaatgctatg
tactgcaacgccactgctgcgtggcgggcccacaagcgaggcgcttacttcgccaaccct
tgcttcacccagattcaccccacttgtattcccgtatccggcgactaccagtcgaagctg
acactgatgtcggagtcgctgcggaacgacggccgcgtgtgggtacccaagacggtggaa
atggcagagcgggtacgcaaaggcgaaatcaagcctcaagacattgccgaggatgaccgt
gactatttcctggagcgcaaataccctgcattcggcaacctagtaccacgcgacgtagcc
tcgcgcaacgccaagcagatgtgcgacgagggtcgtggcgtcgggtcaactggcctggct
gtctacctcgatttcgccgatatcatcaagcggacgggtgccgaagcagtgagccagaag
tacggcaacctgtttgccatgtacgagaaaatcaccgacgaggacccctacaaacagccg
atgcgcatctatccggcggtacactacaccatggggggcctgtgggttgactataacctg
caaaccaccgttcctggtctgtacgctaccggcgagtgcaatttctcagaccacggcgct
aaccgcctcggggcttcggctctgatgcagggcctggctgacggctacttcgtgattccc
tacaccattggggactacctggcctctacgccgcccaaacccgttacgaccgaacaccca
gccttcaaacaggccgaggccgatgtgcggggccgcatcagcaagctgatgagcatcaac
ggaacccgcacgcccgacgacttccacaaacatctgggccacctgatgtgggaatactgc
ggcatggcgcgtaacgccgaagggctcaagcacgccaaagcagagattcagaagttgcgc
caggagttctggagcgacctaaagctgtccggcacagaaggagaattgaaccaagcccta
gaaaaagccggccgtgttgccgacttcctggaactgggtgaattgatggtggacgatgct
ctggaccgcaacgaaagctgcggtggccacttccgtgaggaatatgctacggaggacggc
gaagccaagcgtaacgacgatgactatgcctacgtggctgcctggcagtatgtggccgac
aatcagcccgaaatcctgaacaaggagcagctgacattcgaaaacgtgaagctcacgcag
cgaagctataagtaa
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