Hymenobacter sediminicola: H4317_14735
Help
Entry
H4317_14735 CDS
T09117
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4317_14735 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsk01007
]
H4317_14735 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsk03016
]
H4317_14735 (lysS)
Enzymes [BR:
hsk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
H4317_14735 (lysS)
Amino acid related enzymes [BR:
hsk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H4317_14735 (lysS)
Transfer RNA biogenesis [BR:
hsk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H4317_14735 (lysS)
Prokaryotic type
Other AARSs
H4317_14735 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Ribonuc_red_lgN
Motif
Other DBs
NCBI-ProteinID:
QNH61402
UniProt:
A0A7G7W4V9
LinkDB
All DBs
Position
3447322..3448884
Genome browser
AA seq
520 aa
AA seq
DB search
MQHLSEQEIIRRQKLEELQKLGIEPYPSELFDVNFYAQEIHDNYHAELNNFQDVSLAGRL
MSIRVKGKASFAELQDASGRIQLYINRDEICPGEDKELYNTVFKKLLDLGDFIGVKGHVF
KTMVGETSIHVTGLTVLSKSLRPLPVVKERTDEATGEKVTYDAFTDPEQRYRQRYVDLVV
NPHVREAFIKRTQLVQAMRNYLNDKGYLEVETPILQPLYGGAAARPFKTHHNTLDMTLYL
RIANELYLKRLIVGGFDGVYEFSKDFRNEGMSRFHNPEFTQMELYVAYKDYYWMMDLVEE
MVERVALALHGKTEVQVGENLINFQRPWKRFTMAESIEHFTGFNIDGKTEDELRAAAKEL
KVGLDPSMGKAKIIDEIFGEHVEPKLIQPTFITDYPVEMSPLAKKHRSKPGLVERFEAIC
NGKEICNAFSELNDPIDQRQRFEDQLELGKRGDTEAMVLDEDFLRALEYGMPPTAGLGIG
IDRLSMIMTNSASIQDVLFFPQMKPENTKSENAPKPEAGA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacctcagcgaacaggaaatcatacgccgccagaagctagaagagcttcagaag
ctcggcattgagccatatccgtccgagctgtttgatgtgaacttctacgctcaggaaatc
cacgataattatcatgctgagctgaataattttcaggatgtaagtctggcaggccgcctg
atgtcgattcgggtgaagggcaaagcctcatttgctgagctacaggacgcttcgggccgt
attcagctctacatcaaccgcgacgaaatctgtcctggcgaagacaaagagctatacaac
accgtgttcaagaagctgctcgacctcggcgactttatcggcgtgaagggccatgtgttt
aaaacaatggtgggcgaaacctccattcacgtaaccggcctcacggtgctgagcaaaagc
ctgcgcccgctgcccgttgtgaaagagcgcaccgacgaagccaccggcgagaaagttacg
tacgacgccttcacggaccccgagcagcgctaccgccagcgttacgtggacctagtggtg
aatccccacgtgcgcgaggcctttatcaagcgtacccagctggtgcaggccatgcgcaat
tacctcaacgataaaggctatctggaggtggaaaccccgattctgcagcctttgtatggt
ggtgcggcggcccggccgttcaaaacccaccacaacacgctggacatgacgctatatctg
cgcattgccaacgagctgtacctcaagcgcctcatcgtgggcggctttgatggggtgtac
gagttcagcaaggacttccgcaacgagggcatgagccggtttcacaacccggaattcacg
cagatggagctgtatgtcgcctacaaagactactactggatgatggatctggtggaggaa
atggtggagcgcgtggccttagctctgcacggcaaaaccgaagtgcaggtgggcgagaac
ctcatcaacttccagcgcccttggaagcgcttcaccatggccgaatcgattgagcacttc
acaggcttcaacatcgatggcaagaccgaagatgaactgcgcgctgccgccaaggaattg
aaagtaggcctcgaccccagcatgggcaaagccaaaatcattgacgaaatctttggggag
catgtggagcccaagctgattcagcccacgttcatcaccgattacccggtggaaatgtcg
ccgctggccaagaagcaccgcagcaagccaggcttggtagagcggttcgaggcaatctgc
aacggcaaggaaatctgcaatgccttctccgagctcaacgaccccatcgaccagcgccag
cgcttcgaagaccagctggagttgggcaagcgcggcgacacggaagctatggtactggac
gaggatttcctgcgggctctggagtacggcatgccgcctacggccggactaggaatcggc
atcgaccgcctgagcatgattatgactaactccgcttccattcaggatgtgttgtttttc
ccgcagatgaagccggaaaacacgaagtcagaaaatgcgccgaagcctgaagctggtgca
taa
DBGET
integrated database retrieval system
