Hymenobacter sediminicola: H4317_16605
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Entry
H4317_16605 CDS
T09117
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4317_16605 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_16605 (recO)
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H4317_16605 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H4317_16605 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QNH61754
UniProt:
A0A7G7W5W1
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All DBs
Position
complement(3864853..3865569)
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AA seq
238 aa
AA seq
DB search
MLIKTRGIVLSYIRYRETSIIARVYTERLGVQSYVVNGVRKAKPPGRIALFQPLTLLELV
AYTSRTGGLTRLSEFRCAEPYSSLPYDVQKSSVALVLSEILGHALLEEEENEPLFQFLHD
SLLTFDQQTSGHENFALTFLLGLARYLGFGVESGEEITTQVAFAATAPTAQGSGPAVLRL
QEFEQYFDELLRDPAHATVPNGRIRRELLAVLIRYYQLHVERLGEVRSLSILSEVLAE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaaaacccgcggtattgttctgagctatatccgataccgggaaaccagcatc
attgcgcgggtatacaccgagcggctgggtgtgcagagctacgtagtgaatggcgtgcgc
aaagccaagcccccgggccggattgcgctgtttcagccgctcacgctgctggagctggtg
gcctacacctcacgcactggcggcctcacccgtctctcggagttccgctgcgccgagccg
tacagcagcctgccgtacgatgtgcagaaaagcagtgtggcattggtgctatccgaaatt
ctgggccacgcgctgctggaagaagaggaaaacgagccgctattccagtttctgcatgat
agcctgctgaccttcgaccagcagaccagcggccacgagaacttcgcgctgacatttctg
ctgggtttggcccgctacctgggtttcggcgtggaaagcggcgaggaaattacaacgcag
gtggcttttgctgctaccgcgcctaccgcgcagggcagtggcccggctgtgctgcgcctg
caggagtttgagcagtattttgatgaacttctccgcgacccggcgcacgccacagtgcct
aatggccgtatacggcgcgagctgctggcggtgcttatccgatactaccagctgcacgtg
gaacggctgggcgaagtccgctctctgtctattttgtcagaagtgctggctgagtag
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integrated database retrieval system
