Hymenobacter sediminicola: H4317_16645
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Entry
H4317_16645 CDS
T09117
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk00550
Peptidoglycan biosynthesis
hsk01100
Metabolic pathways
hsk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H4317_16645 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H4317_16645 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsk01011
]
H4317_16645 (mrdA)
Enzymes [BR:
hsk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H4317_16645 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hsk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H4317_16645 (mrdA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
QNH61762
UniProt:
A0A7G7W5W9
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All DBs
Position
complement(3874619..3876457)
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AA seq
612 aa
AA seq
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MQYLEGRRFVVAAIFLAVALTFGARLFYIQVLDGSYKLAADRNTLQRIVQVPYRGLIYDR
KGQLLVQNTPVYDLMVVPREVKQLDTVRFCQLLQLPLEEVRESLKMARAYSRVKASPLVQ
NLSTPELAAIQDNLIDFPGFSIKARMARSYRTENMAHALGYVGAITPAFLEKEKYAKYLP
GDFLGISGLESFYEQQLMGKRGVQYRMVNVRGIEKGSFRDGEYDTLSVAGQDLHTSIDIE
LQKYGEMLMRNKRGSIVALDPKTGEILAMVSAPGFEPSVLTGKGMGNRYMELLQDTAKPL
FNRPLMATYPPGSVFKLVNELVALQMGVVTPQTSFDCNWKLVRCTHRHEHPYNVSIAIKN
SCNPYFYQVMRTAVLRGRSTNRFEDARLGYSEWRRQVMTFGLGEKLGVDISQEKKGLIPT
SDFYDKAYGFHRWNFRTIYSLSIGQGEMGITGLQMANVMATIANRGYYYTPHFVKGIGSG
GPLPQFRERHVTVVDPKYFETIIPGMQQVVDGRGGTGSNASLLDVGISVAGKTGTVQNRH
GADHATFAAFAPAEDPKIAIVVFIENAGFGGSSAAPLASLMIEKYLRGDIAPWRKRWENW
LQGPAEQFIRKR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatatctcgaaggacgccggtttgtggtggcggctatttttctggctgtagctctc
accttcggagcccggcttttctacattcaggtgctcgacggcagctacaaactggccgcc
gaccgcaacacgctgcagcgcatcgtgcaggtgccctatcggggcctgatctatgaccgc
aaaggccagttgctggtgcagaacacgcccgtctacgacctgatggtggtgccgcgcgaa
gtaaagcagctcgatacggtgcgcttctgccagctgctgcaattgccgctggaagaagtg
cgtgaatcgttgaaaatggcccgtgcttactcccgcgtcaaggcctcgccgctggtccag
aacctgagcacgcccgagttggctgccatccaggacaacctcatcgactttcccggcttc
agtatcaaggcccggatggcgcgctcctaccgcaccgagaacatggcccacgcgctgggt
tatgtaggcgccatcacgccggctttcctggagaaggagaagtatgccaagtatctgccg
ggcgactttttgggtatttcggggctggaatccttctacgagcagcagttgatgggcaag
cgcggcgtgcagtaccgtatggtgaatgtgcgcggcattgagaaaggctcgttccgcgac
ggcgaatacgatacgctgtcggtggccgggcaggatttgcacaccagtatcgacattgaa
ctgcagaaatacggtgagatgctgatgcgcaacaagcgcggctccatcgtagccctcgac
cccaaaaccggcgaaatcctggccatggtatcggcgccgggcttcgagccgtcggtgctg
acgggcaagggcatgggcaaccgctacatggaactactccaggacacggccaagccgctc
ttcaaccgcccgctgatggctacctacccgccgggctcggtatttaagctggtaaacgaa
ctggtggcgctgcaaatgggcgtcgtgacgccccagaccagcttcgactgcaactggaag
ctagtgcgctgcacccaccgccacgagcacccctacaacgtcagtattgccatcaaaaac
agctgtaacccctatttctaccaggtgatgcgcacggctgtactgcgcgggcgttccacc
aaccgcttcgaggatgcccgactaggctacagtgagtggcggcggcaggtgatgaccttc
gggctgggcgaaaagctgggcgtcgatatttcgcaggagaaaaagggtctgattccaaca
tcagacttctacgataaggcctacggatttcaccgctggaactttcggaccatctattcg
ctgtccattgggcagggcgaaatgggcattaccggcctacagatggccaacgtcatggca
accattgccaaccgcggctattactacacgcctcatttcgtgaagggaatcgggagcggc
gggccgctgccacaattccgggaacggcatgtgacggtggtagacccgaagtatttcgaa
acgattatcccgggcatgcagcaggtggtagatggccgcggcggcaccggcagcaacgcg
tctttgctggacgtaggcatttcggtggcgggcaaaaccggcacagtacagaaccgtcac
ggtgccgaccacgccaccttcgcggcttttgccccggccgaagaccccaagattgccatt
gttgtgttcatcgaaaatgccggtttcggcggctcatcggcggccccattggcttctctg
atgattgagaaatacctgcgcggcgacattgcgccctggcgcaaacgctgggaaaactgg
ctccaagggccagccgaacaatttatccgcaaacgataa
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