Hymenobacter sediminicola: H4317_17475
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Entry
H4317_17475 CDS
T09117
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
hsk
Hymenobacter sediminicola
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsk02000
]
H4317_17475
Transporters [BR:
hsk02000
]
Other transporters
Pores ion channels [TC:
1
]
H4317_17475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
QNH61916
UniProt:
A0A7G7W6C3
LinkDB
All DBs
Position
complement(4078295..4081111)
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AA seq
938 aa
AA seq
DB search
MTQVFTRVFSLLLGVLLLLTQVAQGQSTGTSIAGSVSSATGDILVGATVAAIHLPSGIRR
TATTDGTGQYAIPEVLAGGPYTVQVAHPGHRTQLLTNVFLVAGQTVQFPFTLAVATLAVG
TRRTDRTVLESPVPVDVIDMRELLPVVPQTDLSQLLNFSVASFNSTRQTSADGADHVDPI
SLRGMAPDQSLVLVNGKRLHTTALINLLGSRGVGSVGYDLNTISANALDRVEVLRDGAAA
QYGSDAIAGVMNFTLKSANKGGNVLLNTGITTEGDGLTGLLSLNRGLRLGQKGFLNLTAD
ADYRGATTRHYTRNIVSWPVFSYNANEEKARLAASGKTYDDFEQVNGDAKIRNLRGMYNL
RLPFTDKVAFYSFGGYNFRRGEAVAPWVLPASADADIVESIFPYGYQPNINTRIHDASGT
AGFVFGLGQWSLDVSQVLGRNSLRYDISNTLNSSLGSNSPRQFDAGGLVFTQSVSNATFS
RLFPKLLAGTNVAFGGEFRHDRYEIVAGEKGSYFDYAQGKEGASAGAQGFIGFDPAFAVD
GTRNNVGAFADVEADVTKKWTVGTALRFENYSDFGSAFIYKVDTRLQLAKALAVRAAYNT
GFRAPALQQVLYRQLTLLPTSEGARYSGLFNNQSNVARAAGIGSLRPEKSRNLSAGLVIT
PTASLTFTADAYQIDIDDRILLSGIFGIDTTGARPALNQALLAANADNAQFFTNAANTRT
RGLDLVATYRNALGRGSLNVSLAANFNNTRIRSLQVPLQFQNLQTDRTSEGRLKPGNDYL
DQRQLSLLETGNPASKLILSTGYDIKKFSVLLRNFYFGQVKSYDFNFDPLDEGSVYMVFR
PKTTTDLSLSYRPVKALSLTAGVNNVFDVYPDDIMTATRNGRAPDGFKSFDEFNAYYLAK
YGKPSNLPYDFDILPYQSQQMPFNGRFVYLKAVYTVGL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtctttacccgcgttttctctcttcttctaggcgtgctcctgctgctcacg
caggtagcgcagggccagagtaccggaaccagtattgccggttccgtgagttcggcaacc
ggtgacatactggttggggcaaccgtggcggccattcatttgcccagcggtatccggcgc
acggccaccacagacggtaccgggcaatacgccattcccgaggtgctggctggcggcccc
tacaccgttcaggtagcccatccggggcaccggacgcagctgctcaccaatgtgtttctg
gtggccgggcaaacagtgcagtttccctttacgctggccgtcgccacgctggccgtaggt
acgcgccgtaccgaccgcacggtgctggagtcgccagtgccggtagacgtgattgacatg
cgggagctgctgcccgtagtgccgcaaaccgacctgagccagttgctcaacttttcggtg
gcctccttcaactcaacccgacagacctccgccgatggcgccgaccacgtcgaccccatc
agcctgcgcggaatggcgccggaccagtcgctggtgctcgtgaacggcaagcgcctgcac
accacggcccttatcaacctgctcggcagccgcggggtgggcagcgtaggctacgacctg
aacacgatttcggctaatgcgctggaccgggtggaagtcctgcgcgacggggccgcggct
cagtacggttccgatgccattgctggggtaatgaacttcaccctgaagtcggccaacaag
gggggcaacgtgctgctcaatacgggtattacaaccgagggcgacggtcttacgggcctg
ctcagcctcaacaggggcttgcgcttgggccagaaaggcttcctgaatctgacggccgac
gccgactaccgcggcgctaccacccgccactacacccgcaacattgtatcatggccggtc
ttttcctacaatgccaatgaggaaaaagcccgtctggccgccagtggcaaaacctacgat
gacttcgagcaagtcaacggcgacgctaaaatccgcaacctgcggggtatgtacaacctg
cgcctgcccttcaccgataaagtggccttctactcatttgggggctacaatttccgcagg
ggagaggccgttgcgccgtgggtgctgcccgcttctgccgatgccgatattgtggaaagc
attttcccgtacggctaccagccgaatatcaacacgcgcattcatgacgcctccggcacg
gccggcttcgtcttcgggctgggccagtggagcctagacgtaagccaggtgctgggccgc
aactcgctgcgctacgacatcagcaacacgctcaatagctcgctgggaagcaactcgccc
agacagtttgacgccggcggcctggtctttacccagagcgtgagcaatgccacgttcagc
cgcctgtttccgaagctgctggcgggaaccaacgtcgcctttgggggcgaattccgccac
gaccggtacgaaatagtggccggcgagaaaggttcttacttcgattacgcccagggcaag
gaaggcgcatcggccggggcacagggcttcattggcttcgacccggcctttgccgtagat
ggcacccgcaacaacgtaggggctttcgcggacgtggaagccgacgtaaccaaaaagtgg
acggttggtacggccctgcgcttcgagaactacagcgactttggctcggccttcatctac
aaggtggatacgcgcctgcagctggccaaggcgctggccgtgcgtgcggcctacaacacc
ggtttccgcgccccggccctgcagcaggtgctctaccgccagctcacgctgctgcctacc
tccgaaggggcccgctacagcggcctgttcaacaaccagagcaacgtagcccgggccgcc
ggcatcggcagcctgcgccctgaaaaatcgcgcaacctcagtgccggcttggttatcacg
cctaccgcctcgctcacgttcacggccgacgcgtaccagattgatatcgacgaccggatt
ctgctgtcgggcattttcggaattgatactaccggggcccgcccggcgctcaaccaggcc
ttgctggctgccaacgccgacaacgcgcagttctttaccaacgccgccaacacccgtacc
cgcggcctcgacctggtagccacctaccgcaacgcgctgggccgtggctcgctcaacgtg
agcttggctgctaatttcaacaacacccgcattcgtagcctgcaggtgcctctgcagttc
cagaacctgcaaaccgaccgcacgagcgaaggccgcctcaagcccggcaacgactacctc
gaccagcgccagctttccctgctggagaccggcaatcctgccagcaagctcatcctcagc
accggctacgacatcaagaaattcagcgtgctgctgcgcaacttctacttcggacaggtg
aagagctacgacttcaacttcgacccgctggacgaaggcagcgtgtacatggtgttccgg
cccaaaaccaccaccgacctgtcgttgagctaccggcccgtaaaggcgctgtcgctcacg
gccggcgtcaacaatgtgttcgacgtgtatcccgacgacatcatgactgcaacccgcaac
ggccgggcgcccgacggcttcaagtcgttcgacgagttcaatgcctactacctggccaag
tacggaaagccttccaacctgccctacgatttcgatatcctgccctatcagtcgcagcaa
atgccgttcaatggccgctttgtgtacctgaaggctgtatatactgtagggctgtag
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