Hymenobacter sediminicola: H4317_17480
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Entry
H4317_17480 CDS
T09117
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk00300
Lysine biosynthesis
hsk00470
D-Amino acid metabolism
hsk00550
Peptidoglycan biosynthesis
hsk01100
Metabolic pathways
hsk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4317_17480
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H4317_17480
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H4317_17480
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H4317_17480
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsk01011
]
H4317_17480
Enzymes [BR:
hsk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
H4317_17480
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
H4317_17480
Peptidoglycan biosynthesis and degradation proteins [BR:
hsk01011
]
Precursor biosynthesis
Amino acid ligase
H4317_17480
Racemase
H4317_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QNH61917
UniProt:
A0A7G7W6C4
LinkDB
All DBs
Position
complement(4081575..4084073)
Genome browser
AA seq
832 aa
AA seq
DB search
MLDFTADLPALTGGTLLLAPAGPAPIQSLLLDSRRVGQAIGSVFFALRGPQHNGHRYLPE
LYKQGVRLFVVDRVEEVPGGLLAYPEASILLVADALAALQAVAAAHRRRFRLPVLGITGS
NGKTIVKEWLAQLLAPDELLCKSPRSYNSQVGVPLSVWELNATHTLGIFEAGISERGEMA
RLAAVIQPTLGLFTNLGTAHDAGFSSPQEKVEEKMQLFLGVDTLFYCLDHELIHAAASRH
LPEHRTFTWSRQHPHLAHVAVTVAEASADRTVVRVSMARPLPQEHTFTLPFADEPSVENA
LHALAVLLWHQVPAAEIQHRLDRLQPVAMRLEMKQALNDCYVLDDTYNNDLAGLSLALDA
LARQPRRGRRTLILSDVLESGLAGPKLYARAAAQLATHGVDRLIGIGPEIRLHQLAFQGV
ELAFHDTTEDFLRHFRPDDFRHETILVKGARRFGFERIVAAFQQKIHGTVLEVNLDALAH
NLNFYRRRLQPGTKLMVMVKAFAYGSGSAEVANLLQFHRADYLAVAYTDEGVDLRRQGIS
LPVMVMNPSPDAFQKLRQYHLEPEIYSFERLLDYLRAAQEQPLPAIHLKIDTGMRRLGFA
EEDLPELVQLLRENAAHLRVASALTHLAGADEEQHNDFSRRQLAAFQRMTPVLEEALGYP
IIKHALNSAGILRFPEAHFDMVRLGIGLYGVEASGHEQDALQPVSTLRTTISQVKTLPPG
ETVGYGRRGQAADFERRIATLAIGYADGYDRRFGNGAGEVVIRGQRAPLIGNVCMDMCMA
DVTHIIGAQAGDTAEIFGPQLPLSELAVRIGTIPYELLTNVSERVKRVFVAE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatttcactgccgacctgcctgccctcactggcggcaccctgctgttggccccg
gccggccctgcacccattcagtcgctgctcctggatagccgccgcgttggtcaggctatt
ggtagcgtgttctttgctctgcgcggcccccagcacaacggccaccgctacctgcccgag
ctctacaagcagggcgtgcggctctttgtggtagatagggtagaggaagttcccggtggt
ctgctggcctatcctgaggctagcattctgctggttgcagatgcgttggccgccctgcag
gccgtggccgccgcccaccgccgccgcttccgtctgcccgtgctcggtatcaccggctcc
aacggcaaaaccattgtgaaggagtggctggcccaactgcttgctcctgatgagctcctc
tgcaaaagcccccgttcctacaattcgcaggtaggtgtaccgctcagcgtctgggagctg
aatgccacgcacaccctcggtatcttcgaagcaggcatctctgagcgtggcgaaatggcc
cgtctcgccgccgtcatccagcctactcttggcctgtttaccaacctcggcactgcccac
gatgcgggtttcagcagcccccaggagaaggtagaagagaaaatgcagctcttcctcggc
gtcgatacgctcttttactgcctcgaccatgagctgattcatgccgctgccagccgccac
ctgcccgagcaccgcaccttcacctggagccgccagcacccacaccttgcccatgtggcc
gtgacggtggccgaggcttccgccgaccgcaccgtggtgcgtgtaagcatggcccgcccg
ctgccccaggagcatacgttcacgctgcccttcgccgacgagccttccgtcgaaaacgcc
cttcacgccctggcggtgctgctctggcaccaagtgcccgccgccgaaatccagcaccgc
ctcgaccggctccagcccgtggccatgcgcctggagatgaagcaggctctaaacgactgc
tacgtcctcgacgacacctacaacaatgacctcgccggcctttcactcgccctcgatgcc
ctggcgcgccagccccgccgtggccgtcgcaccctcatcctgagcgacgtgctggagtcg
ggtcttgccggtcccaagctctacgcccgtgccgctgcccagctcgccacccacggcgtc
gaccggctcattggcatcggtcccgaaatccgcctgcaccagctggcctttcagggtgta
gaattggccttccacgacaccaccgaggatttcctacgtcactttcgccccgacgatttc
cgccacgaaactattctcgtcaaaggtgcccgccgcttcggtttcgagcggattgtagcc
gccttccagcagaaaatccacggtacggtgctggaagtaaacctcgatgcgctggcccac
aacctgaatttctatcgtcgccgcctgcagcccggcaccaagctcatggtgatggtgaag
gctttcgcctacggcagcggctcggccgaagtcgccaacctgctccagtttcaccgcgcc
gactacctcgccgtagcctacaccgacgaaggcgtggacctgcgccggcagggcatcagc
ctgcccgtcatggtgatgaatccctcgcccgacgctttccagaagctgcgccagtaccat
ctggagcccgaaatctattccttcgagcggctcctcgactacctgcgcgccgcgcaggag
cagccgctgcccgccattcacctcaagatcgataccgggatgcgccgcctcggtttcgcc
gaagaagatctgccggaactcgtgcagctcctgcgcgaaaacgccgcgcatctgcgtgtg
gccagtgccctcacccacctcgccggcgccgacgaagagcagcacaacgacttctcgcgc
cgccagctggccgccttccagcgcatgacgcccgtgctcgaagaagccctgggctacccg
attatcaaacacgccctcaactcagccggcatcctgcgcttccccgaagcccacttcgac
atggtgcgcctcggcatcgggctctatggcgtggaagccagcggccacgagcaggatgcg
ctgcagcccgtcagtacgctgcgcactaccatttcgcaggtgaaaaccctgccgcccggc
gaaaccgtgggctacggccgccgcggccaagctgctgatttcgagcggcgcattgccacc
ctggccatcggctacgccgacggctacgaccggcgcttcggcaacggcgcgggcgaagtc
gttattcggggccagcgcgccccgcttatcggcaatgtctgcatggacatgtgcatggcc
gatgtcacgcacatcattggggcccaggccggcgacaccgccgaaatcttcgggccgcag
ctgccgctgtccgagctggcggtgcgcatcggtaccattccttacgagctgctgaccaac
gtgagcgagcgggtgaagcgcgtgtttgtggcggagtag
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