Hymenobacter sediminicola: H4317_17635
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Entry
H4317_17635 CDS
T09117
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hsk
Hymenobacter sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_7
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
QNH61943
UniProt:
A0A7G7W6F0
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All DBs
Position
4117762..4123626
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AA seq
1954 aa
AA seq
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MHTPLRTSALAGPPPATERRTGRWLRRLPALALLGLLGASAAQAQVVRTLPGTYASLSAA
ITDLNTNGVPAGGVTINVAAGYTETAINLTLTATGTSANPIVFQKAGTGTNPLVTAATGS
TSTTLDAIIKLVGSDYVTFDGIDLAESAANTTAATQAEFGYALFRASATDGSQYNVIKNC
VVTLNKTNANTIGIYSANSLSTATTALAVTSADGSNSNNKVFGNVVSNAATGVQFSGSSA
AGFLDANNEVGGTVGNTIGNFGSTTTNWGIGGSNQLGFKVVGNTINSTLNYTSATASTPV
AASTVTSTLRGVYTPSGTSANIDITSNIITLASGGTTAQMSGVENGAGNTAANNTVNISN
NTVSLTYTTATSATVHGIYNSASPATVIMSGNTLSATLSNTGTTFMLDNNSSAATITALN
NQVTSLSRTGASGAVYGYYNNASGTGTQTVSNNTFNNVTVAGTSTFYGVYSNTAATETQI
RTGNTVSNVTGGTGAIYGMFTAYGTATSQFSNNIVTGISTGGTIYGLYFGNTAFAGYEAF
GNTVSALSSTGTSSIIYGIYTSSTTSNVFRNKVYNLSGTGTGLTVYGIGVLGGTTVTIHN
NLVGDLRAPAATGTAAISGLYVNAGTNVNLYYNTVYLNATSSGAIFGTSGFYFATAPTSL
DLRNNVVVNKSTAAGTGGYTAALRRASGTAGTVPANLATTTNNNLYYAGTPSATNLIYVE
GTTTATNASQTLADYKSFVAPRELASQTEDVPFLSTTGTDATFLHINPAVPTLVEGKGQP
ISSITTDFDGDTRNTTTPDLGADEGTFIPGGASVDVAASGLVSPAATGCYGPAESVTVAI
QNNGTAALDFAANPATVTVNVTGPVTQTLTATVNTGTLAPGATQSVSVGTLNMSAAGTYS
FAISATATGDGNTANDNIVVTRSKTAVAAQPQQLNFTGLTATNLSTLYPGWYEATGATLP
TGTTSAWTADDFGNVVSGPNGTAAKINLFSTGKNDWIVGPRILATASTLLSYDLALNTFG
ATTVGTLGSDDRLEVRVSADCGLTFTTVKTYTASTAISNTGQLEQINLGNYAGQEIIVAF
FATEGTVDDTNDNDLFIDNVNLGNGAAVDLAPVALLTPPTGQTCYSTAENVTVSVRNIGT
AALDFAANPATVTVNVTGPVTQTLTATVNTGTLAPGATQSVSVGTLNMSAAGTYSFAIAA
TATGDGNTANDNLVTAPTRVVTAPVAGTITPSAASLCVSGTVTLTLTGSSNGSIQWQQSA
DNVTFTDISGATSATYTSGVLTSTTYFQARTVCNVAVATSNVATVTINNPQITTTNSPVA
ICEGSTATLTATAATGTTVRFFDAASGGTALATGTSFTTPALTASRQYFVEATTSSTETV
GRLAPAATTSTTASSYGLVFNATAATQLQSVDVYPAGTAGNLVVQVQDNTGILIPGLTAT
VAIPAGTGTTPFTVPLNFNIPAGTGMRLIAVSSPAMVRESSLGGFPYVSPSGNVSITNGY
ISGTSTTYYYFYNWQVSSECIGTRTPIQVNVTPAPTATLPATATTCAATAFQLTGTVGGS
ATTGTYTSTGTGTFSPNATTLNATYTPSAADATAGSVTITLTADPATGSGCSTATAQTVL
TITPATTATFSYAATTLCVSGTASTPTITGTAGGTFSSSTGLTINATTGVITPATSTPGT
YTVTYSVAGNCPSSATTTVTITTAPVASFSYANAAYCLGATGSAAPVFGTGASAGTFSAS
GTGLVLNTTTGAINLATSAAGTYTVTNTIAASGGCAASTATFSVTINARPAQPTVAPAYN
GTTTTLTSSSATGNQWYLNGALIPGATSQTYVVNSAAQFGQYTVVVTNATTGCASLPSAQ
LLVNSSVKVLAGSSLSVYPNPTTDGNVTVELSGYTNATELHVYNAVGQLVHHTTAAGKSG
VQTATLDLRQLPAGVYILRARTEGGLDVRRITKE
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacctttacgcacgtctgctctggctggtccgcccccggctacagagcggcga
accggccgctggttgcggcgcctgccagccctggcgcttttggggctattgggcgcttct
gccgcgcaggcgcaggtagttcgcacactacccggtacttacgctagcctctcggccgcc
atcaccgacctgaacactaatggtgttccagctggtggggttaccatcaacgtagcggca
ggctacaccgaaacggctatcaacctgaccctgacggccaccggcaccagtgccaaccca
attgtgtttcagaaagccggaaccggcaccaacccgttggtaacggccgctactggcagc
accagcacgacgctggatgccatcatcaagctggtaggctccgactacgttacgttcgac
ggtattgacctagctgaaagtgcggccaacacgacggccgccacgcaggccgagtttggt
tacgcgctgttccgtgcttctgccacggatggcagccagtacaacgtcatcaagaactgc
gtggtgacgctgaacaagaccaacgccaacaccatcggtatctatagtgccaactcgctg
tctaccgccacaacggccctggccgtgaccagcgcggacggtagcaactccaacaacaag
gtgttcggcaacgtggtgagcaatgcagccacgggtgttcagttttcgggtagctcggcc
gcgggcttcctggatgccaacaacgaagtcgggggtaccgtcggcaacacgattggcaac
ttcggcagcacgactaccaactggggcatcgggggctccaaccagcttggcttcaaagtg
gtgggcaacaccatcaacagcacgctgaactatacgtcggccacggcttccacgccggta
gctgcctccaccgtgaccagcaccctgcgcggcgtatatacgccctcgggcacatcggcc
aacatcgacatcaccagcaacatcattacactggctagcggtggtaccacggcgcagatg
tcgggggttgaaaacggagccgggaatacggcggccaacaacaccgtcaacatcagcaac
aacaccgtttccctgacctacaccaccgctacttcggctacggtacatggcatttataac
tctgcgtcgccggctacggtgataatgagcggcaacacgctgagcgctacgctctcgaac
accggcaccacatttatgctggataacaactcgagtgcggccaccatcacggcactgaac
aaccaggtaacgagcctgagccgcacgggtgcatccggcgcggtgtatggctactacaac
aatgcctcgggcaccggcacccaaacggttagcaacaacacgttcaacaacgtgacggtg
gcgggtaccagcacgttttacggcgtgtactccaacacggccgctaccgaaacgcagatc
cgcacgggcaacactgtcagcaacgttacgggtggcacaggcgcgatatacggcatgttc
acggcgtatggcactgcgacttcgcagttcagcaacaacatcgtaaccggtatcagcact
ggcggcaccatttacggactgtatttcggcaacaccgcttttgctggctatgaggctttc
ggtaacactgtaagcgcgctaagctctactggtacctccagcattatctacggtatctac
acctcgtccaccacgtccaatgtcttccgcaacaaggtatataacctgtcgggtacgggc
acgggcctcacggtttatggcatcggggtgctgggcggtactacggtaacaattcacaac
aacctcgttggcgacctgcgggccccagcagctacgggcacggcggccatcagcggcctg
tacgtgaatgccggcaccaacgtgaacctgtactacaacaccgtatacctgaatgccacg
agttccggtgccatattcggcacgtcgggcttctatttcgctaccgcgcctacttcactg
gacctacgcaacaacgtagtagtgaacaaaagcaccgcggcgggtacgggtggctacacg
gcggccctgcgccgcgcttccggcacagccggcacggtaccggccaacctggctactacc
accaacaataacctctattacgccggtacgccttcggccacgaacctgatttatgtggaa
ggcactactaccgctaccaacgccagccagacactggcagactacaaatcatttgtagca
ccacgcgaattggcttcccagacggaggacgtgccgttcctgagcaccaccggtaccgac
gccacttttctgcacatcaacccagccgttccaacgctggtagaaggcaaaggccagccc
atcagcagcatcaccaccgactttgacggtgacacgcgcaacacaactactcccgacctg
ggcgccgatgaaggcacctttataccgggtggagcttcagtagatgtggccgccagcggc
cttgtttcgccagcagccacgggctgctacggtccggcagagagcgtgacggtagccatc
cagaacaacggtacggcagcgcttgatttcgccgcgaatccagctacggtgacggtaaac
gtcacgggtcctgtgacccagacgctgacggcgaccgtgaataccggcaccctcgcacca
ggcgctacgcaaagcgtctcggttggcacactcaacatgagcgccgccggcacgtattcc
ttcgccatttccgccaccgccaccggcgacggaaatacggctaatgacaacattgtcgta
acgcgcagtaaaactgccgtagctgctcaaccacagcagctcaatttcaccggtcttacg
gccacgaacttgtcaacgctctacccaggctggtatgaggctacgggcgctacgctgccc
accggcactacttcggcctggaccgccgacgactttggcaacgtggtaagcggaccgaat
ggaacggctgctaaaatcaacctgttctccaccggcaaaaacgattggattgtagggccg
cgcattctggccacagccagcaccctgctgagctatgatctggccctgaatacgtttggt
gccactaccgtcggcacgctgggctccgatgaccggctggaagtacgtgtttcggccgat
tgtggcttgacatttacgacagtaaaaacctacacggccagcaccgccatcagcaacact
ggccagctagagcagataaacttgggcaactacgcggggcaggaaatcattgtggctttc
ttcgctaccgaaggcaccgtagatgatacgaacgacaacgacctgtttatcgacaacgtg
aacctgggcaacggcgcggccgttgatctggcacccgtagcgctactgacaccgcctacc
ggccagacgtgctacagcacggccgagaacgtaacggtatcggtgcgcaacattggtacg
gcagcgcttgacttcgccgcgaatccggccacggtgacggtaaacgttacgggtcctgtg
acccagacgctgacggcgaccgtgaataccggcaccctcgcaccaggcgctacgcaaagc
gtctcggttggcacactcaacatgagcgccgccggcacgtattccttcgccattgccgcc
accgctaccggcgacggaaatacggctaatgacaatctggttaccgcacctacccgtgta
gtaacggcaccggttgcgggcactataactcccagcgcagcctcgctgtgcgtgagcggc
accgtgacactgacactgacgggctccagcaatggcagcatccagtggcagcagtccgcc
gacaacgtgaccttcaccgacatcagcggggctacttcagctacctacacgtcgggtgtg
ctcacaagcactacgtatttccaggcccgcactgtatgtaatgtagccgtagctacttcc
aacgtagctaccgtcaccatcaacaacccacagataaccactaccaactcgccggtagcc
atctgtgagggcagcacggccactctaacagccacggccgcaactggtaccacggtacgc
ttctttgatgctgcttctggcggcacagcgctggctacgggtacctccttcactacgccg
gctctcacagcttcgcgtcagtatttcgtggaagctaccacgagcagcaccgaaaccgtt
ggccgcctggcacctgctgctactaccagcactaccgcctccagctacggtctcgtgttc
aatgctaccgctgctacgcaattgcaatcagttgatgtgtatccggctggcactgctggc
aacctagtagtacaggtgcaggacaataccggcattctgattccgggcctgacggctaca
gtagctattccggccggcacgggcactacgccgttcacagtacccctgaacttcaacatt
ccggctggtaccggcatgcggctgattgccgtgagcagcccggccatggtgcgcgagtcg
agcctgggtggttttccttacgtgtcgcctagcggcaatgtgagcattaccaatggctac
atctcaggtacttccactacttattactacttctacaactggcaggtatcgtcggaatgt
atcggaacgcgtacgcctatccaggtgaacgtaacgccggccccgacggctacgctacct
gctacggccactacgtgtgccgccacggcgttccagcttaccggaacggtaggcggctcg
gctactaccggcacgtataccagcacgggtacaggcaccttctcgcctaatgctaccacg
ctgaatgccacgtacacgccctccgcagctgatgccacggctggcagcgttacgattacg
ctcacggctgatccggccactggctcgggctgctccacggctacggctcaaaccgtacta
acgattactccagctactacagcaacgttcagctacgcggccacgacgctgtgcgtgagc
ggcacggccagcacgcccaccatcacgggcacggccggcggcacattcagcagcagcacg
ggtctgacgattaatgctacgaccggtgtgattacgcccgccaccagcacgcccggcact
tacactgtgacctacagcgtggccggcaactgcccgtcctcggctaccacgaccgtgacc
atcaccacggcgcccgttgccagcttctcctacgctaacgccgcctactgcctcggcgct
accggctcggctgcgcctgtctttggcaccggtgcctcggctggtacgttctcggcctca
ggcacgggcttggtgcttaacaccaccactggcgctatcaacctggctacctcggccgct
ggcacctacaccgtgaccaacaccattgccgccagcggtggttgcgccgcctcgacggcc
acgttctcggtgaccatcaacgcccggccggcccagccgacggtggccccggcctacaac
ggcacgaccaccacgctcaccagctccagcgccacgggcaaccagtggtacctgaacggt
gcgctcatccccggggccaccagccagacgtacgtggtcaactcggccgcccagtttggc
cagtacacggtggtcgtgaccaacgccaccaccggctgcgcctcgctgccttcagcccag
ctgctggttaactccagcgttaaggtgctggccggctcctcgctgagcgtgtatccgaac
ccaaccaccgacggcaacgtgacggtggagctgagcggctacaccaacgccaccgagctg
cacgtctacaacgccgtggggcagttggtgcatcacaccacggccgccggcaagagcggc
gtgcagactgccacgctggacctgcgccagctgccagccggcgtctacatcctgcgtgcc
cgcaccgaaggcggacttgatgtgcgccgcatcaccaaagaatag
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