Hymenobacter sediminicola: H4317_17975
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Entry
H4317_17975 CDS
T09117
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03030
DNA replication
hsk03410
Base excision repair
hsk03420
Nucleotide excision repair
hsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4317_17975 (polA)
03410 Base excision repair
H4317_17975 (polA)
03420 Nucleotide excision repair
H4317_17975 (polA)
03440 Homologous recombination
H4317_17975 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsk03032
]
H4317_17975 (polA)
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_17975 (polA)
Enzymes [BR:
hsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4317_17975 (polA)
DNA replication proteins [BR:
hsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4317_17975 (polA)
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4317_17975 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4317_17975 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNH62007
UniProt:
A0A7G7W6L4
LinkDB
All DBs
Position
4205601..4208486
Genome browser
AA seq
961 aa
AA seq
DB search
MTPDASAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAAKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKQIIKAFHIPILMVEGYEA
DDVIGTLARRAEAQGFGEVFMMTPDKDYCQLVTDCIKIYRPAFMGNAAEILDVAHVLQRF
EIERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDQLKGKQQEN
VRNFAEQGLMSKELATIHLDVPIEFEAEKLVLDQPDAEALRQLFDELEFRQLAARVLGGG
SPAGVSAAPVGRGARRPKTAEGQGSLFGSSADAAVAIGAEEGETGSFGAPAGPRRTLADV
PHQYHLIDTPELRKSLLEFLLQQTEVSFDTETTGLDTMTARLVGLSFCWLPGEAYYVPVP
HDDHAAAQALIDEFCPFFEAAHILKIGQNIKYDLTILKHYKVTINGPLFDTMLAHYLLEP
DMRHGMDVLAETYLHYTPVPITALIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHV
FEPLLKEVGLLDLLNEVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIVDIEKQIFS
EAGQEFNIGSPKQLGEVLFDKMDIGKGKIKKTKTGQYATGEEILSQLAAENPIAALILEY
RQLSKLRSTYVEALPQLVCELDGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDASHVLLAADYSQVELRIMADFSGDKTMIEAFRQGLDIHTSTASKVFKVPLNEV
DSEMRRKAKTVNFGIIYGISAFGLAQRIGISRKEATDIIDTYFEEFSSVKQFMDDSINKA
RELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHEWLRQ
EKLGTRMILQVHDELVFDAVQEEVAYITPKIKELMATALLLPHGVPLEVEVGTGQNWLQA
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgacgcctccgctgcccagcctcacaagcttttcctgctcgacgcttttgcc
ctgatttaccgtgcccactttgcgttcagcaagaacccgcgcgtgaactccaagggactc
aatactggagccatcttgggcttcaccaacacgctggtagaggtgttgcagaaggaaaag
cccacgcatattggtgtagcgtttgatgccgctaaaaagacgttccgccacgagcagtac
gccgaatacaaagctcaacgccaggctatgcccgaggatatcggcttggccatcccctac
atcaagcagataattaaggccttccacattcctattctgatggtggaagggtacgaggcc
gacgacgtaattggcacgctggcccgccgcgccgaggcccagggtttcggggaggtgttc
atgatgacgcccgacaaggactactgccagctcgtcacggactgcatcaaaatctaccga
ccagccttcatgggcaacgccgccgaaattctggacgtggcgcacgtgctgcagcgcttc
gagattgagcggccggagcaggtgattgacattttgggactccagggcgacgcctccgac
aacattccgggcattccgggcatcggcgaaaagacggctaaaacactgatccagaagtat
ggctcggtggaaaacctgattgccaatgtggaccagctcaaaggcaagcagcaggaaaac
gtgcgcaacttcgccgagcagggcctgatgagcaaggagctagccaccatccacctagat
gttcccatcgagtttgaggccgaaaagctggtgctagaccagcccgatgccgaggcgttg
cgccagctgttcgatgagctggaattccggcaactggctgcccgcgtgctgggcggcggc
agcccggccggtgtgagtgcggcgccagttgggcgtggggcccgccgccccaaaacggct
gaaggtcagggcagtttgtttggttcatcggcggatgcggcggtagccattggtgctgaa
gaaggagaaaccggctcgtttggcgcgccagctggcccgcgccgcacgctggccgacgtg
ccgcaccagtaccacctcatcgacacgcccgagctgcgcaagtcattgctggagtttctg
ctacagcaaaccgaggtcagcttcgacacggagacaaccggcctcgacaccatgacggcg
cggctggtgggcctctccttctgctggctgccgggcgaggcgtattatgtgcccgtgccg
cacgacgaccacgccgccgcccaagccctgattgatgagttctgcccgttttttgaggcc
gcgcatattctcaaaatcggccagaacatcaagtacgaccttaccatcctcaaacactat
aaggtcaccatcaacgggccgttgtttgataccatgctagcccactatctgctggagccc
gatatgcgccacggcatggatgtgctggccgaaacctacctgcactacacgccggtgccc
atcacggcgcttatcggccccaaaggcaaaaaccagaaaaccatggccgacctgcccccg
gccgaggtatcggactacgcctgcgaagatgccgacgtgacgctgcaactcaagcacgta
ttcgagccgctgctgaaggaagtgggcttgctggacttgctcaacgaggtggaaaacccg
ctggtgccggtgctggccgacatcgagtacgaaggcgtgaaaatcgactcctcggctatg
ggcgaatactcggccgagctgcagggctacatcgtcgacatcgagaagcagattttttca
gaggccggccaggagttcaacattggctcgccgaagcaactgggcgaagtgctgttcgat
aaaatggacatcggcaaaggcaagatcaagaaaaccaagaccggccagtacgccaccggc
gaggaaatcctgagccagctggccgccgaaaaccccattgccgccctcattctggaatac
cgccagcttagcaagctgcgcagcacctacgtggaggccctgccccagctagtgtgcgag
ctggatggccgcgtgcacaccagcttcaaccaggccgtgacagccactggccgcctcagc
agcaccaaccccaacctgcagaacattcccatccgcaccgaaaagggccgcgaaatccgc
aaggccttcgtgccccgcgacgccagccacgtgctgctagccgccgactactcgcaggtg
gagctacgaatcatggccgacttctcgggtgataaaacgatgattgaagccttccgccag
ggcctagacattcataccagcaccgccagcaaggtgttcaaagtgccgctgaacgaagta
gacagcgaaatgcgccgcaaggccaaaaccgtcaatttcggtatcatttacggcatttcg
gccttcgggctggcccagcgcatcggtatttcgcgcaaggaagccaccgacatcattgac
acctatttcgaggagttttcgtcggtgaagcagtttatggacgacagcatcaacaaggcc
cgggagctggagtacgccactaccctgctgggccgccgccgctacctgcgcgacatcaac
tcgcgcaacgccacgctgcgcggctacaccgagcgcaacgccatcaacgcccccatccag
ggcaccgcggccgatatcatcaagaaggccatgatcaacatccacgagtggctgcgccag
gaaaagctcggcaccagaatgattctgcaggtgcacgacgaactggtgttcgatgcggtg
caggaggaagtggcctacatcacgcccaaaatcaaggagctaatggctactgccctgctg
ctgccccacggcgtgccgctggaagtggaagtcggcaccggccagaactggctgcaggcg
cactga
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