Hymenobacter sediminicola: H4317_18305
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Entry
H4317_18305 CDS
T09117
Name
(GenBank) PAS domain-containing protein
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H4317_18305
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsk01001
]
H4317_18305
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hsk02022
]
H4317_18305
Enzymes [BR:
hsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
H4317_18305
Protein kinases [BR:
hsk01001
]
Histidine kinases
OmpR family
H4317_18305
Two-component system [BR:
hsk02022
]
OmpR family
VicK-VicR (cell wall metabolism)
H4317_18305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_3
PAS
HATPase_c_2
PAS_8
HATPase_c_5
PAS_4
RIH_assoc
DUF7674
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNH62072
UniProt:
A0A7G7W6S9
LinkDB
All DBs
Position
complement(4288580..4289671)
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AA seq
363 aa
AA seq
DB search
MLDFSTLFRPLAEHSQLLYFVYHLEAQKFLYVSPAYETILGRPATAVNEEWPNLLALVHP
DDQAYAEGCFRHLLHGTFLEDVELRLLHPDGRVQHLCFAVSRVSESAGCSYLSGTVHDYT
STREYMDNADRFNKKKNATLEILSHDLAGPFVMMEQLAGYVGEKILPLQDTKLDELLRVM
KTTCQDSISLIRDFVDNEFMESSHVELKIERVDMVAELREMLEEYQRSEEHLSKNFLFRP
ESPSAYIEVDNNKFMQVINNLISNAIKFTPDGGQIEVSVVEEPGRVLVSVADNGIGIPKQ
LMPVLFDRFTPARRPGLRGEKTTGLGMSIIKTIVELHKGHIHCQSVEQQGTTFTIELPRK
EPA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctagacttttccacgctgttccgtccgctcgccgaacatagccaactgctttacttt
gtctatcatcttgaggcgcagaaatttctctacgtcagtccggcttacgaaaccatactg
ggccggccagctacggccgtgaatgaggaatggccgaatctgctggccctggtgcacccc
gacgaccaagcctacgccgaggggtgtttccggcatttgctgcatggcacttttctggaa
gatgtggagctgcgcctgctgcatcccgatggccgtgtgcaacatctgtgcttcgcggtg
tcgcgggtgagcgaaagcgctggctgcagctacctaagtggtaccgtgcatgactacacc
agcacccgcgagtacatggataacgcggaccgtttcaacaaaaagaaaaacgcaacgctc
gaaattctctcccacgatctggccggccccttcgtcatgatggagcagctggccggctat
gttggggagaaaatactgccgctgcaggataccaagctcgatgagctgctacgcgtgatg
aaaacgacctgccaggacagtatcagcctgattcgggacttcgtggacaacgagtttatg
gaatcttcgcatgtggagctgaagattgagcgggtggatatggtagctgaattgcgcgaa
atgctggaggagtaccagcgttccgaggagcatctgtccaaaaacttcctgtttcgcccc
gagagtcccagcgcctacatcgaggtggataataacaagttcatgcaggtgattaacaac
ttgatttctaacgctataaaattcactccggacggtgggcagattgaggtaagcgtagtc
gaagagccgggccgcgtgttggtttccgtcgccgataacgggattggtattccgaagcag
ctgatgcccgttctgttcgaccggtttacacccgcgcggcgaccaggcctgcgcggcgaa
aaaaccactggcttgggcatgtccattatcaaaaccattgtagagttgcacaaaggccac
attcattgccagagcgtggagcagcaaggcactaccttcacgatagagctgccgcgcaaa
gagcctgcctag
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