Hymenobacter sediminicola: H4317_18955
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Entry
H4317_18955 CDS
T09117
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hsk
Hymenobacter sediminicola
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsk03016
]
H4317_18955 (truA)
Enzymes [BR:
hsk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H4317_18955 (truA)
Transfer RNA biogenesis [BR:
hsk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H4317_18955 (truA)
Prokaryotic type
H4317_18955 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QNH62191
UniProt:
A0A7G7W748
LinkDB
All DBs
Position
complement(4442412..4443203)
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AA seq
263 aa
AA seq
DB search
MRYFLHLAYDGTRYHGWQVQPNTLTVQQELDRCLSQVLRQPVFCLGSGRTDTGVHASHQV
AHFEAELPETLDIKTLLYRLNRALPPDIAAYALHPVPPQAHARFSADARTYEYYVRQVPD
PFSVGRALYVDLPPDVAAMNEAAAHLLGSRDFTAFSKVKGGENHYVCVVYEAGWHEMPGG
LVFRIRANRFVRGMVRLVVGTLLSVGRGKITPAQFQQILWAQSRVDASGAAPAQGLYLSR
VEYTPDVVPAELVPPGLPYFVGR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctactttcttcatctggcctacgacggcacccgctaccatggctggcaggtgcag
cccaacaccctcacggtgcagcaggaactggaccgctgcctgtcgcaggtgctgcgccag
ccagtgttttgcctgggcagcggccgcaccgacaccggtgtgcacgccagccaccaagta
gcgcacttcgaggccgagctgccggaaacgctggacatcaagaccctgctctaccgcctc
aaccgtgccctgccacccgacattgcggcttacgcgcttcacccggtgccgccacaggct
catgctcgcttctccgccgatgcccgcacctacgagtactatgtgcgccaggtgcccgac
ccgttcagtgtgggccgcgccctctacgtggacctgccgcccgacgtggccgccatgaac
gaagccgccgcccacctgctcggctcgcgcgacttcacggcgttttccaaggtgaaaggc
ggcgaaaaccactatgtgtgcgtggtgtatgaggccggttggcacgaaatgcctggcggg
ctggtgttccgcatccgggccaaccgcttcgtgcggggcatggtgcggctagtggtgggc
acgctgctgagtgtgggccggggcaaaatcacgcccgcgcagtttcagcagattctgtgg
gcccagagccgcgtggatgccagcggcgccgctccggctcagggcctctacctgagccgc
gtggaatacacacccgatgtggtgcccgccgagctggtaccgcccggtttgccgtacttt
gtgggccggtag
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integrated database retrieval system
