Halobacterium salinarum R1: OE_1299R
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Entry
OE_1299R CDS
T00662
Symbol
hop
Name
(GenBank) halorhodopsin
KO
K04642
halorhodopsin
Organism
hsl
Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsl04030
]
OE_1299R (hop)
G protein-coupled receptors [BR:
hsl04030
]
Others
Others
Bacterial rhodopsin
OE_1299R (hop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
DUF6326
Motif
Other DBs
NCBI-ProteinID:
CAP13054
UniProt:
B0R2U4
Structure
PDB
PDBj
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All DBs
Position
complement(155843..156667)
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AA seq
274 aa
AA seq
DB search
MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPR
LIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMIL
LALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAISCAFFVVVLSALV
TDWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGVTSWAYSVLDVF
AKYVFAFILLRWVANNERTVAVAGQTLGTMSSDD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcacgagtgtacccggtgtggtcgatgcgggggtgctgggcgcgcaatcggcg
gccgcggtccgcgagaacgcgctgttgagttcgtcgctgtgggtgaacgtcgcgctcgcg
gggatcgcgatcctcgtgttcgtgtatatgggacgcaccatcagaccgggacgaccgcgg
ctcatctggggggcgacgctgatgatcccgctggtgtcgatctccagctacctcgggctg
ctgtcggggctcaccgtggggatgatcgagatgcccgccgggcacgcgctggccggcgag
atggtgcgcagtcagtgggggcggtatctcacgtgggcgctgtcgacgccgatgatactg
ctggcgctggggctgctggcggacgtcgatctcggcagtctgtttaccgtgatcgcggcc
gacatcgggatgtgcgtgacggggttggcggcggcgatgaccacgtcggcgctgctcttc
cggtgggcgttttacgcgatcagttgcgcgttcttcgtggtggtgttgtccgccctagtg
accgactgggcggcgtcggcgtcgagcgccggcaccgcggagatcttcgacacgctgcgc
gtgctcacggtggtgctctggctcggataccccatcgtgtgggcggtcggcgtggagggg
ctggcgctcgtgcagtccgtgggagtcacgtcctgggcgtactcggtgcttgacgtcttc
gcgaagtacgtcttcgcgttcatcctgttgcggtgggtggcgaacaacgagcggaccgtg
gcggtcgccggccagacgcttggcaccatgtcaagcgacgactga
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