Halobacterium salinarum R1: OE_1770F
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Entry
OE_1770F CDS
T00662
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hsl
Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsl03400
]
OE_1770F (rad50)
DNA repair and recombination proteins [BR:
hsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OE_1770F (rad50)
Archaeal homologous recombinant proteins
OE_1770F (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
AAA_29
AAA_27
Mod_r
ABC_ATPase
CENP-F_leu_zip
MukB
ZnF_RZ-type
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAP13307
UniProt:
B0R3J3
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All DBs
Position
388382..391033
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AA seq
883 aa
AA seq
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MRFTRLSLSNFKCYADAAVSLDPGVTVIHGLNGSGKSSLLDACFFALYGTTALDTTLADA
VTIGAETAEIDLHFEHAGGDYHVHRRIRASGGRAQTAACVLETPTDRIDGVTDVEAHISG
LLRMDAEAFVNCAYVRQGEVNKLINAAPSTRQDMIDALLQLGKLEEYRQRAGDARLGVED
VKSNVEGQLDRLADQIADKEAADPHDRLASHNTALAEVTADIEHFEAEREQARQTRDDAA
DVLERYEESRTALADVEETIADVREAVAEAERERETLADRVSDHRERASDLDDEAAALAA
DLGLDDPDAEDASAERDAVADQREAVAERVREVAPAVSRLTEQADSAADDAATLDERAET
LREEAAALDAEADDAAAKRDDAAARIEALDADIEAAMAAFDDAPVAFGAAEAFLDDATAE
RDELRERVATLRADRQSAADRVAEAEALLDEGKCPECGQPVEGAPHVERVTDDRERVAEL
DAELADVEDELDAVAQRVDRGESLVAAEDRVDDLEQQRERAVERRDEQADIADAKRDQAA
EKRDRAADLDAEAEDARADAAAKRDAADEKRETLAALNADQTALKERLDALADLVDRLEA
AADAREAAQRLAEKRAALAAQNEQRRDRLSELRERKRTLDSEFDADRIETARADKDRAED
YLEQVEPKLQALREDRDDLQAKIGAAENAIAELESLREEHERVQSRHQDLQAVHDEVTAL
ETMYGELRAELRQQNVSKLERLLNETFELVYQNDSYARIELSGEYELTVYQKDGEPLEPA
QLSGGERALFNLSLRTAVYRLLAEGIEGDAPLPPLILDEPTVFLDSGHVSQLVELVESMR
RLGVEQIVVVSHDDELVAAADDVVRVAKDATSNRSRVSTPEHI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcacgcgcctctccctgtcgaacttcaaatgctacgcggacgccgccgtctcc
ctggaccccggcgtgaccgtcatccacgggctgaacggcagcggcaagtccagcctgctc
gacgcctgctttttcgcgctgtacggcaccaccgccctcgacacgaccctcgctgacgcc
gtgacgatcggcgcggagacggccgagatcgacctccacttcgagcacgccggcggcgac
taccacgtccaccgccggatccgtgcgtccggcgggcgcgcccagaccgccgcctgtgtg
ctggagactccgaccgaccggatcgacggcgtcaccgacgtcgaagcccacatctcgggg
ctgttgcgcatggacgccgaggcgttcgtgaactgcgcgtacgtccgccagggcgaggtg
aacaagctcatcaacgccgccccgagcacgcgccaggacatgatcgacgcgctcctccag
ttggggaaactcgaggagtaccgccagcgcgccggcgacgcccgcctcggcgtcgaggac
gtcaagagcaacgtcgaggggcaactcgacaggctcgccgaccagatcgctgacaaggag
gccgccgacccccacgaccggctggcgagccacaacaccgcgctcgccgaggtcaccgcc
gacatcgagcatttcgaggccgaacgcgagcaggccaggcagacccgcgacgacgccgcg
gacgtcctggagcgctacgaggagtcacgcacggcgctcgcggacgtcgaggagacgatc
gccgacgtccgcgaggccgtcgccgaggccgaacgcgaacgggagacgctcgccgaccgc
gtcagcgaccaccgcgagcgcgccagcgatctcgacgacgaggcagcggcgctcgcggcc
gatctcgggctcgacgatccggacgccgaggacgccagcgcggagcgcgacgccgttgcc
gaccagcgggaggcggtcgccgaacgggtgcgcgaggtcgcaccggctgtctcccggctc
accgagcaggccgacagcgccgccgacgacgccgccaccctcgacgagcgcgccgagacg
ctgcgcgaagaggccgcagccctcgacgccgaggccgacgacgcagcggcgaaacgcgac
gacgccgccgcccgcatcgaggcgttggacgccgacatcgaggcggcgatggcggctttc
gacgacgcgccggtcgcgttcggggccgccgaggcgttcctcgacgacgcgacggccgaa
cgcgacgaactgcgcgagcgggtggcgacgctccgcgccgaccggcagtccgctgccgac
cgcgtcgccgaggctgaggcgctgctcgacgaggggaaatgccccgaatgcggacagccg
gtcgagggggcaccccacgtcgagcgtgtcaccgacgaccgcgagcgcgtcgccgagctc
gacgccgagttggcggacgtcgaggacgaactcgacgcggtggcccagcgcgtcgaccgc
ggcgaatcactggtggccgccgaagaccgggtcgacgacctcgaacaacaacgcgagcgc
gccgtcgagcgccgcgacgagcaggccgacatcgcggacgcgaaacgcgaccaggccgcc
gaaaagcgcgaccgcgccgcggacctcgacgccgaggccgaggacgcccgtgcggacgcc
gcggccaagcgtgatgcggccgacgagaagcgcgagacgctggcggcgctgaacgccgac
cagaccgccctcaaggagcgactggacgcgcttgcggatctcgtcgaccgcctcgaagcg
gccgccgacgcccgcgaagccgcccagcggctggccgagaagcgcgcggcactggccgcc
cagaacgagcagcgccgggaccgcctctcggagctgcgcgagcgcaagcgcacgctggac
agtgagttcgatgcggaccgcatcgagacagcgcgcgccgacaaggaccgcgccgaggac
tacctcgaacaggtcgaaccgaaactccaggcgctgcgcgaggaccgcgacgacctccag
gcgaagatcggcgctgcggagaacgccatcgcggagctggagtcgctgcgcgaggagcac
gagcgcgtgcagtcacgccaccaggacctccaggcggtccacgacgaggtgaccgcgctc
gagacgatgtacggggagttgcgggcggagctgcgccaacagaacgtctcgaagctcgaa
cgcctcttgaacgagaccttcgagttggtctatcagaacgactcctacgcccgcatcgag
ctgtccggcgagtacgagctcaccgtctaccagaaggacggcgagcccctggagcccgcg
cagctctcggggggcgagcgcgcgctgttcaacctcagcctgcgcactgccgtctaccgg
ctgctggctgaggggatcgagggcgacgcccccctcccgccgctgatcctggacgaaccg
actgtgttcctcgactccgggcacgtctcgcagctcgtggaactggtggagtcgatgcga
cggctcggcgtcgagcagatcgtggtcgtgagccacgacgacgagctggtggcggccgct
gacgacgtggtgcgggtcgcgaaagacgccacgtcgaaccggtcccgtgtgtccaccccc
gaacacatatga
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