Halobacterium salinarum R1: OE_2118F
Help
Entry
OE_2118F CDS
T00662
Symbol
tfeA
Name
(GenBank) transcription initiation factor TFE
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OE_2118F (tfeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsl03021
]
OE_2118F (tfeA)
Transcription machinery [BR:
hsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
OE_2118F (tfeA)
Prokaryotic type
Archaeal type
TFE
OE_2118F (tfeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DUF7129
DNA_ligase_ZBD
Zn_ribbon_8
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAP13500
UniProt:
B0R435
LinkDB
All DBs
Position
564526..565044
Genome browser
AA seq
172 aa
AA seq
DB search
MAFEDLLDDPVVQKYLHELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFQYENVPGNLREEMDRLLEALVDRREYELENEFYLCE
VCSIRFEFGEAMDLGFECPECGSAVEAMENTDLVDAMDDRIERLRSELAVEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacttacttgacgaccccgtggtacagaagtacctccacgagctggtc
ggaccgaaggggatgcccgtcgcggccgcgccgccggacggcgaggtgaccgacgaggag
ctcgccgagcgactcgggctggagctcaacgacgtgcggcgcgcgctgttcattctctac
gagaacgacctcgcgacctaccgccgggtccgcgacgaggactcggggtggctcacgtat
ctctggacgttccagtacgagaacgtgccggggaacctccgcgaggagatggaccgactg
ctggaggcgctcgtcgaccgccgcgagtacgaactcgaaaacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggcgaggcgatggacctcgggttcgagtgtccggag
tgtggctccgccgtcgaagccatggagaacaccgacctcgttgacgcgatggacgaccgc
atcgagcgactgcgctcggaactcgccgtggaggcctaa
DBGET
integrated database retrieval system
