Halobacterium salinarum R1: OE_3348F
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Entry
OE_3348F CDS
T00662
Symbol
sopI
Name
(GenBank) sensory rhodopsin I
KO
K04643
sensory rhodopsin
Organism
hsl
Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsl04030
]
OE_3348F (sopI)
G protein-coupled receptors [BR:
hsl04030
]
Others
Others
Bacterial rhodopsin
OE_3348F (sopI)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
Motif
Other DBs
NCBI-ProteinID:
CAP14202
UniProt:
B0R633
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All DBs
Position
1227934..1228653
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AA seq
239 aa
AA seq
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MDAVATAYLGGAVALIVGVAFVWLLYRSLDGSPHQSALAPLAIIPVFAGLSYVGMAYDIG
TVIVNGNQIVGLRYIDWLVTTPILVGYVGYAAGASRRSIIGVMVADALMIAVGAGAVVTD
GTLKWALFGVSSIFHLSLFAYLYVIFPRVVPDVPEQIGLFNLLKNHIGLLWLAYPLVWLF
GPAGIGEATAAGVALTYVFLDVLAKVPYVYFFYARRRVFMHSESPPAPEQATVEATAAD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgcaaccgcctacctcggcggcgcggtcgcgctcatcgtcggtgtggcg
ttcgtctggttgctgtaccggtcgttggatggctccccgcatcagtcggcgctcgcgccg
ctggccatcattcccgtgttcgcgggcctgtcctacgtggggatggcgtacgacatcgga
acggtgatcgtaaacgggaaccagatcgtcgggctgcggtacatcgactggctcgtgacg
acgccgatcctcgtggggtacgtcggctacgccgcgggggcgtcccgtcgcagcatcatc
ggtgtgatggtggcggacgcgctcatgatcgcggtgggcgcgggggcggtggtgactgac
ggcacgctcaagtgggcgctgttcggcgtgtcgtcgatcttccacctgtcgctgttcgcg
tacctgtacgtgatctttccgcgggtcgtgcccgacgtgcccgagcagatcgggctgttc
aacctgctgaaaaaccacatcgggctgctgtggttggcgtacccgctggtgtggctgttc
ggcccggccggcatcggggaggcaacggctgccggcgtcgcgctcacgtacgtgttcttg
gacgtgctcgcgaaggtgccgtacgtgtatttcttctacgcgcggcgtcgcgtgttcatg
cactcggagtcgccgccggctcccgagcaggcgaccgtcgaggcgacggcggcggactga
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