Halobacterium salinarum R1: OE_3893F
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Entry
OE_3893F CDS
T00662
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OE_3893F (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsl01007
]
OE_3893F (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsl03016
]
OE_3893F (serS)
Enzymes [BR:
hsl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OE_3893F (serS)
Amino acid related enzymes [BR:
hsl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OE_3893F (serS)
Transfer RNA biogenesis [BR:
hsl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OE_3893F (serS)
Prokaryotic type
OE_3893F (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PCRF
FapA
Fmp27_WPPW
Motif
Other DBs
NCBI-ProteinID:
CAP14517
UniProt:
B0R6Z8
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All DBs
Position
1513686..1515068
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AA seq
460 aa
AA seq
DB search
MLSRQFVREHPEKVRDALDAKGVDADLDRILEVDEEWRELKARGDELRHDRNEVSSKIGE
LKQAGDEDAAQEAIERSQALKDELADVEARADDLEAELERLLLTLPMVPDEDAPVGDSEA
ENVERRREGFDDRRDLPESVVPHYDLGEELDILDFERGAKVSGGGFYFSKGAGARLEHAL
VQFMLDVHREQGYEDVFPPMPVSARSMEGTGQFPKFVEDAYRIGGENDADYDDDDLWLLP
TAEVPVTNMYRDEILLDDDLPVKHQAYSPNFRREAGEHGTETRGIVRVHQFNKVELVNFV
RPEDSAERFHGLLDEAEAVLRRLDLPYRVLEMCTGDMGFTQAKKYDIEVWAPGDDMDGGP
EMGGRWLEVSSVSNFKDFQARRADIQYRPERHESAEHLHTLNGSGVAVPRVLVAILEYYQ
NDDGTVTVPEALQPYMNGQTRIEGSRKVGESALGDGDREA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcccgacaattcgtccgcgagcaccccgagaaagtgcgggacgccctcgatgcg
aagggcgtggacgcggacctcgaccggatcctggaggttgacgaggagtggcgcgaactg
aaagcgcggggcgacgagctccgccacgaccgcaacgaggtgtcctcgaagatcggcgag
ctcaagcaggccggcgacgaggacgccgcccaggaggcaatcgagcgctcgcaggcgctc
aaagacgagttggcggacgtcgaggcgcgcgccgacgacctggaggcggagctcgaacgc
ctgctgttgacgctgccgatggtgcccgacgaggacgcgccggtcggcgacagcgaggcc
gagaacgtcgagcgccgccgcgaggggttcgacgaccgccgcgatctgcccgagtcggtg
gtgccacattacgacctcggcgaggagttggacatcctggatttcgagcgcggcgcgaag
gtctccggcggcgggttctacttctcgaagggggcgggcgcgcgcctggaacacgccctc
gtgcagttcatgctcgacgtgcaccgcgaacagggttacgaggacgtgttcccaccgatg
ccggtgtcggcgcggtcgatggagggcaccgggcagttcccgaagttcgtcgaggacgcc
taccgcatcggcggcgagaacgacgcggactacgacgacgacgacctctggctgctgccg
accgcggaggtcccggtgacgaacatgtaccgggacgagatcctgctggacgacgacctc
ccggtgaaacaccaggcgtactcgccgaacttccgccgggaggccggcgagcacggcacg
gagacccgggggatcgtgcgcgtccaccagttcaacaaggtcgagctcgtgaacttcgtg
cgcccggaggactccgccgagcggttccacggcctgctggacgaggcggaggcggtgttg
cggcggctcgatctgccgtaccgcgtcctggagatgtgcaccggtgacatggggttcacg
caggccaaaaagtacgacatcgaggtgtgggcgcccggcgacgacatggacggcggcccc
gaaatggggggccggtggctggaggtgtcgtcggtgtcgaacttcaaggacttccaggcg
cggcgggccgacatccagtaccggcccgagcgccacgagtccgccgagcatctgcacacc
ctgaacggatcgggggtggcggtgccccgcgtgctggtggcgatcctggagtactaccag
aacgacgacggcacggtaacggtaccggaggcgctgcagccgtacatgaacggccagacg
cgcatcgagggctcccggaaggtcggcgagtccgcgctgggcgacggcgaccgcgaggcg
tga
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