Halobacterium salinarum R1: OE_4041F
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Entry
OE_4041F CDS
T00662
Symbol
ashA
Name
(GenBank) archaea-specific helicase AshA
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hsl
Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsl03019
]
OE_4041F (ashA)
Messenger RNA biogenesis [BR:
hsl03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
OE_4041F (ashA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CAP14606
UniProt:
B0R787
LinkDB
All DBs
Position
1594454..1596508
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AA seq
684 aa
AA seq
DB search
MSEQVQRVDTLFLHETGDDYLAVANRDGDRLFRAKLEVAEKSAGPRPARFRRKTDGGEEP
RNPEEFVEIARRAGRIRISQQTTAAGREEVQAMLDAYQLAAKVVRTCRYCAGRGRYSPLT
AETAIEADGEFICRDCAVEELERELSFSGAVSGAAQDRLEELLFAEQDLEKVTGLLGGEL
DPDLTKYDEVSATTDDVDPVAVSELDLHPDVQGLFEDRFEELLPVQSLAVENGLVEGDDQ
MVVSATATGKTLVGEIAGLHRLQSGNGKLLFLVPLVALANQKHEDFQDEYGHLANVTIRV
GSSRIRDDGHAFDPAADIIVGTYEGIDHALRTGRDLGDIGTVVIDEVHTLKEDDRGHRLD
GLISRLKYYCEQRREERAGYDGAQWVYLSATVGNPGELAGKLRANLVEFEERPVPIERHV
TFADGAEKPDIENTLVRREFDQESSMGYRGQTIIFTNSRRRCNEISRKLDYPSRPYHAGL
DYGERKSVERQFGDQDLAAVVTTAALAAGVDFPANQVIFDTLAMGIEWLSVQEFEQMLGR
AGRPDYHDRGKVYVLVEPDASYHSSMEGTEEEIAFTLLKGDMENVVTHYDEDAAVEETLA
NVTVGGTAAKRLNDRMVGDIPTKHALGKLLEYEFIDGLEPTDRGRAVTTHFLDPDSAFRI
LDGVRKGHAPGRIIATLELREDDQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagcaggtccagcgcgtggacacgttgttcctccacgagacgggcgacgactac
ctcgcggtggccaaccgcgacggggaccggctgttccgcgcgaaactagaggtcgcggag
aagagcgccgggccccgtccggcccggttccggcggaagaccgacggcggcgaggagcca
cgcaaccccgaggagttcgtggagatcgcgcgccgcgccggccgcatccgcatcagccag
cagacgacggccgcgggccgcgaggaggtccaggccatgctggacgcctaccagctcgcc
gcgaaggtggtgcggacgtgtcggtactgcgcgggccgcgggcggtactccccgctcacc
gcggagaccgccatcgaggccgacggcgagttcatctgccgggactgcgcggtcgaggag
ctggagcgcgagctctccttttcgggggcggtgtcgggggccgcacaggaccgcctcgaa
gagctgctgttcgccgagcaggacctcgaaaaggtcaccgggctgctgggtggcgagctc
gaccccgacctgacgaaatacgacgaagtgtcggcgaccaccgacgacgtcgaccccgtg
gccgtctcggagttggacctgcatccggacgtccaggggctcttcgaggaccgcttcgag
gaactgctgcccgtccagagtctcgccgtcgagaacgggctcgtcgagggtgacgaccag
atggtggtgtcggcgacggcgaccgggaagacgctggtcggcgagatcgcgggcctccac
cggctgcagtccggcaacggcaagctgctgtttctcgtcccgctggtggcgctggccaac
cagaaacacgaggacttccaggacgaatacggccacctcgcgaacgtcaccatccgcgtg
gggtcctcgcggatccgggacgacggccacgccttcgaccccgccgcggacatcatcgtc
ggcacctacgagggcatcgaccacgcgctgcggacggggcgcgacctgggcgacatcggc
acggtcgtcatcgacgaggtgcacacgctcaaggaggacgaccgcggccaccgcctcgac
ggcctcatctcgcggctgaaatactactgcgagcagcgccgcgaagagcgcgcgggctac
gacggcgcccagtgggtgtatctctccgcgaccgtcggcaaccccggcgagctggcgggg
aagctgcgcgcgaacctcgtggagttcgaggagcgccccgtgcccatcgagcgccacgtc
acgttcgccgacggcgccgagaagcccgacatcgagaacacgctcgtccgccgtgagttc
gaccaggagtcctcgatggggtaccgcgggcagaccatcatcttcaccaactcgcggcgg
cgctgcaacgagatctcgcgcaaactcgactacccctcgcggccgtaccacgccggcctc
gactacggcgaacgcaaatccgtcgagcgacagttcggcgaccaggacctcgcggccgtc
gtgacgacggcggcgctcgcggcgggcgtcgacttccccgccaaccaggtcatcttcgac
acgctggcgatgggcatcgaatggctctccgtccaggagttcgagcagatgctcggccgc
gccggccgtcccgactaccacgaccgcgggaaggtgtacgtgctcgtcgaacccgacgcg
tcgtatcactcctcgatggagggcaccgaggaggaaatcgcgttcacgctcctgaaaggc
gacatggagaacgtggtcacgcattacgacgaggacgccgccgtcgaggagacgctggcg
aacgtcaccgtcggcggcacggccgccaaacgcctcaacgaccgcatggtcggggacatc
cccacgaaacacgccctggggaagctactggagtacgagttcatcgacggcctggagccg
acggaccgcgggcgcgcggtcaccacgcacttcctggatccggacagcgcgttccgcatc
ctcgacggcgtgcgcaagggccacgcgcccggccgcatcatcgcgaccctggaactccgc
gaggacgaccagtag
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