Halobacterium salinarum R1: OE_4056R
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Entry
OE_4056R CDS
T00662
Symbol
tfbA
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OE_4056R (tfbA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsl03021
]
OE_4056R (tfbA)
Transcription machinery [BR:
hsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
OE_4056R (tfbA)
Prokaryotic type
Archaeal type
TFB
OE_4056R (tfbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
PHF5
DZR_2
FYVE
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CAP14618
UniProt:
B0R799
LinkDB
All DBs
Position
complement(1605474..1606337)
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AA seq
287 aa
AA seq
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MQHPHRCPECDGTIRETDTEHVCADCGLVVTDAPIDHGPEWRTFSDDPDHAPERTGAPLT
RSRHDRGLSTEIGYSARLTGRKRRKFARLRRQHKRATIPSKADYNRIYGFTEIRRLIGTF
GIGTGLRDQACTLFASAQTAGLLHGRTIEGFAAAGVYATCRTNGVTRTLDEIAAAARATR
PELTTAYDAMNRDLGLPTGPIDPREYLPRYADALSLPARIERQARELVAALETDGLVAGR
NPSGVAAGCLYTAATETDHAVTQSAAAAVADVTPVTLRATYQNLTDA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatccacaccgctgccctgaatgcgacggcaccatccgcgaaaccgacaccgag
cacgtctgtgccgactgcgggctcgtcgtcacggacgcgcccatcgaccacgggcccgag
tggcggacgttctccgacgaccccgatcacgcacccgagcgtaccggcgcgccgctcacc
cgctcccggcacgaccgcggcctctcgaccgagatcggctacagcgcacggctcacgggc
cgcaaacgccgcaagttcgcacggctccgccgtcaacacaagcgcgccacgatcccctcg
aaagccgactacaaccggatctacgggttcacggagatccgccgcctcatcggcacgttc
ggcatcggcaccgggctccgcgaccaggcctgcacgctgttcgcgtccgcccaaacggcg
ggcctgctccacggccgcaccatcgaggggttcgcggccgccggcgtctacgccacctgt
cggaccaacggggtcacccgcaccctcgacgaaatcgccgccgccgcccgcgccacccgc
cccgagctcaccaccgcctacgacgccatgaaccgtgatctcgggctgccgaccggcccc
atcgacccccgcgaatacctcccacgatacgccgacgccctctccctgccggcccgcatc
gagcgccaggcccgcgaactcgtcgccgcactcgaaaccgacggcctggtcgccggccga
aaccccagcggcgtcgccgccggctgcctctacaccgccgcaaccgagaccgaccacgcc
gtcacgcagtcggccgccgcggccgtcgccgacgtcacgccggtgacgctgcgcgcgacc
taccagaacctcactgacgcctaa
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